Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1091 ATGGACAAGACTGAGAGAGAGACCCATGACTTCATGAATGTTGAGTCTTTCTCTCAGCTTCCCTTTATCCGTCCTGCACCCACCATCAAAGAGAAGGGAATTCGCCTTTTCGGCATCGAATTCGGAAGTGGTGGAGGTAGCTATAACAACACAATCGCCGATGAATCTGACTCTGCAGAAACAACCACCAACAATGCATCTGAACAAGATAACAATAAGGACAACAACAACAGCAACAACAACAACAGCAACAGCAACACCGAGAATGGAGAGAGTAGTAGCCGCAGATTTGAATGCCATTACTGTTGTAGAAACTTCCCAACTTCTCAAGCCTTAGGTGGCCACCAAAACGCGCATAAACGAGAGCGTCAACACGCAAAACGAGCACATCTTCAGTCAGCTATGGTGCACGGAAGCTTCTCCGACCCTCAAGTTTATGGCCTCATGAACTACAGGTTCAACTCAGCTCCAACATCACCAATGGCTTATCCTACATGGAATACCAACTCTTTGAATGCTATCACCGCCACCGCCAATTTTGGCAGCGGTGGCGGCGGTGGAAGGTTTTATAATGGAACCTCATCTTATTCTCATCATCATCAACAACAACAACCCATCAATGGTAGCCCCTTAGGCTTGTGGCGAATCCCTTCAGGGACCACCGTACAGAGTAGTAACCCTAGTTTCAACCATGAAAGGTCGTTGTTGCAGCATCCATTGCCCTTGTTTTCTGGCGAGGAAATCAATATAAGGGCCTCACAGGTTGGTGTTTCTGGTTCACAAAATCGCTACGTTTATGACTCTTCCAAAAGTGACCATGTGAGTTTGGATCTTCATTTGTAA 843 0.4614 MDKTERETHDFMNVESFSQLPFIRPAPTIKEKGIRLFGIEFGSGGGSYNNTIADESDSAETTTNNASEQDNNKDNNNSNNNNSNSNTENGESSSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHGSFSDPQVYGLMNYRFNSAPTSPMAYPTWNTNSLNAITATANFGSGGGGGRFYNGTSSYSHHHQQQQPINGSPLGLWRIPSGTTVQSSNPSFNHERSLLQHPLPLFSGEEINIRASQVGVSGSQNRYVYDSSKSDHVSLDLHL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1091 280 Pfam C2H2-type zinc finger 96 121 - -
Lal24g1091 280 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Lal24g1091 280 PANTHER ZINC FINGER PROTEIN GIS 1 280 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Lal24g1091 280 SUPERFAMILY beta-beta-alpha zinc fingers 94 125 IPR036236 -
Lal24g1091 280 MobiDBLite consensus disorder prediction 48 92 - -
Lal24g1091 280 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Lal24g1091 280 PANTHER ZINC FINGER PROTEIN GIS 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1091 Lal-Chr24 11297638 11298480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1091 1 280 C2H2 Transcription Factor Family AT3G58070 41.034 5.77e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1091 - - vun:114190818 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1091 24 11297638 11298480 Lal24g1091 24 11297638 11298480 ECH