Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0993 ATGTTAGGGCTCACTATCGATGAAAAAGATATGAACTTTGAAGTTTGTGGATGTCAATCTAGTGTTGGTGAGGTGTTTCCAATCACGGTTGGTGAGGATTTTACTCCATATGTGGTGAACGTTTATACTGGAGAGGATGTTTCTATAAAGATTATGTCATTTGCCCAGAAGGGTCTAGGAGGAATATGCATTCTTTCTGCTAATGGAGCTATCTCTAATGTTGCCATACGACAATCGGGTTCTTCCGGAGGCGTTTTGACTTATGAGGGTCTATTTCAGATTTTATCTTTGTCTGGATCATTCACACTCTCTGAAAATAGTGACATGAAAATTCGGAGCGGCGGATTGAGTGTCTCACTATCTGGACCCGATGGTCGTGTGATCGGAGGTGCTGTTGCTGGTCTATTGACAGCTGCTGGTCCCATCCAAATTGTGATGGGAAGCTTCATACCAAATAGTTACAAAACTCATAAAAAGAATCGCGATCATACGTTGGCCTCTCCTATTTCACCTGGTCCAGATACAGTGGCAGAAGCAAGACCTAAAGCGAATCCTAATATTGTAGATGGCGAAAACTATCCGATAACCATGTCCGAGTTACCGGAACAAAACCCGAGAGAATCTGTCAGTGTTATAACAAATGGTGATACGCAGAACCTAGATGCCACACCTAATGTTGCTACGTGGAATGGTTCTGAAGAATTTTCTGATCAGAGGATATCCCCAGACATCAATATATCTTTACCAGATGAATAG 756 0.422 MLGLTIDEKDMNFEVCGCQSSVGEVFPITVGEDFTPYVVNVYTGEDVSIKIMSFAQKGLGGICILSANGAISNVAIRQSGSSGGVLTYEGLFQILSLSGSFTLSENSDMKIRSGGLSVSLSGPDGRVIGGAVAGLLTAAGPIQIVMGSFIPNSYKTHKKNRDHTLASPISPGPDTVAEARPKANPNIVDGENYPITMSELPEQNPRESVSVITNGDTQNLDATPNVATWNGSEEFSDQRISPDINISLPDE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0993 251 Gene3D - 36 166 - -
Lal24g0993 251 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 19 250 - -
Lal24g0993 251 Pfam Plants and Prokaryotes Conserved (PCC) domain 36 149 IPR005175 -
Lal24g0993 251 ProSiteProfiles PPC domain profile profile. 31 172 IPR005175 -
Lal24g0993 251 MobiDBLite consensus disorder prediction 229 251 - -
Lal24g0993 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 250 IPR039605 GO:0003680
Lal24g0993 251 MobiDBLite consensus disorder prediction 165 192 - -
Lal24g0993 251 CDD DUF296 35 149 IPR005175 -
Lal24g0993 251 MobiDBLite consensus disorder prediction 229 243 - -
Lal24g0993 251 SUPERFAMILY AF0104/ALDC/Ptd012-like 33 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0993 Lal-Chr24 8627881 8631400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0993 22 173 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 53.205 5.57e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0993 - - lang:109335220 330.872