Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0990 ATGATTACTCTAGGTCGGCCCATCATTGTTGATTTCTCTCCTGTGACGGATTTTCGAGAAGCTACTTGTAGGCAGTATGAGGAAAATGTCTGTAATCGAGGTGGCTACTGCAACTTTATGCATCTAAAGAAGATCAGCAGGGATTTGAGAAAGCGGTTATTTGGAAGAAACAGGCGCTTTCATGGTCGAAGTGGAAGCAGAAGTCAAAGCCCTCCAAGGAATCGTAAGCATGAGGAGCGTTCACATTCTGGTCGTAGTTCTGATAGAAGAGATTATGACAGGCATCATGGCCACCACGGTAGTAGGGACCGGTTGCCCAGAAGCCGTAGTCCTCAACGAAGAGGAAGACGAAGTAGAAGTCCAGCAGGAAGGGATAGGTCAGCTAGAGAAAATAGTGAAGAAAGGAGAGCCAAAATAGAGCAATGGAACAGGGAGAAGGAACTGGCAGACTCTGGTAACAAGAACAATACCAATGGCAATGGTTATGAAGAACATGATGATGCACAAAATGGAAGTGAATCTGGTAGACACCAGAACGACCAGATATAG 549 0.4554 MITLGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRNRRFHGRSGSRSQSPPRNRKHEERSHSGRSSDRRDYDRHHGHHGSRDRLPRSRSPQRRGRRSRSPAGRDRSARENSEERRAKIEQWNREKELADSGNKNNTNGNGYEEHDDAQNGSESGRHQNDQI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0990 182 MobiDBLite consensus disorder prediction 121 151 - -
Lal24g0990 182 PANTHER RNA RECOGNITION MOTIF DOMAIN, EUKARYOTE-RELATED 5 170 - -
Lal24g0990 182 ProSiteProfiles Zinc finger C3H1-type profile. 17 44 IPR000571 GO:0046872
Lal24g0990 182 MobiDBLite consensus disorder prediction 71 108 - -
Lal24g0990 182 MobiDBLite consensus disorder prediction 55 182 - -
Lal24g0990 182 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 19 42 IPR000571 GO:0046872
Lal24g0990 182 PANTHER U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT 5 170 IPR009145 GO:0000398|GO:0003723|GO:0089701
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0990 Lal-Chr24 8578449 8580289 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lal24g0990 zf-CCCH 0.00015 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0990 K12836 - gmx:100783847 210.305