Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0984 ATGAACATGGAACATCATCATCACCATGACTATGACCATCAAGAAAACTATGCCATAACCGATCTCAGGCAACTCATAAGTGAACCAAGCTCAGCCGGCAATTTCACTTCCATACCGTTACCACCGCAACCCACGGCTGAGCTTTTCCCTAGCCACCACCGGAATCTGACACCTCTCCACCAACAACACTACGAGATGATGATGTTTGGTCGTGACATCATGCCATGTACAACCGATTCTGTTGCTCCAACAAGAGGCATCATTGTAGGTCATGTAGCAACAACAACCACCGCTAGTGCTTCGACTCCTCCACTCAGCGGTGGCGTAGAGGCTGAGACCGCATTCTGCAACGGTGGAGACGCATCCACTGGAAGATGGCCCAGACAAGAAACCCTCACTCTTCTTGATATCAGATCTCGGCTCGACGTTAAATTCAAAGAAGCTAACCAAAAAGGACCCGTGTGGGATGAAGTATCTAGGATCATGTCTGAAGAGCATGGATATCAAAGGAGTGGAAAAAAGTGCAGGGAGAAGTTTGAGAATCTCTACAAATATTACAAGAAGACAAAAGAAGGTAAAGCAAGAAGACAAGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGACAAAACATTAACCACTCATCAATTCCAGAAACCAATTTCTGTAGCAACATTCCTTTTAATACAAGCAAAATTAACACCCCTTATCAAGCAAATCATGAAAATTGTTGTCTCAGCTTCAATAACTCCACTGACTTTGACACATCCTCGTCTGATGATGATGACAATGATCATAATAACAGCGTTGAGGGGCTTATGGAGATTAATAATGAGTCAATGTTGGAGAAGAGGAGGAATAAGAGAAAAAGTGGAAGGAGCTGGAAGGTGAAGATAGAAGACTTGATTGACTCACAGATGAGGAAGCTAATGGAGAAGCAAGAGGAATGGTTGGATAAACTTATGGAGACAATGGAGCAGAAGGAAAAGGAAAGGGTGTTGAGAGAAGAAGAATGGAGGAAACAAGAGGTAAATAGGTTAGAGAGGGAGCACAAGTTTTGGGCTAAAGAGAGAGCATGGATTGAAGCAAGGGATGTTGCTTTAATTGAATCTTTGCAACAGCTAACAGGAAGAAAAATAAAGGGTAGTGAAACTCATGAGGGTGTTGAAGTGGCAGCTGAAATGAGAAACAACAATGAAAACCAGAATGAAGATGGAATTGAAATTCTGAATGGCACTGTAAAAGTTGGTGATTGCTGGAAAGAAACTGAGATTACAAGGCTGCAACAGTTGAGAAGTGAGATGGAAACATGGGAAGAAATAGCAAACAAAATGACTTATTATGGATATGAAAGGACTCCATTGATGTGCAAACAGAAATGGGAGAGTATCAGCAGAAACTACTATAACAAAGAAGGAAACAAGAAGAAGAAGGAAAACTCAAGATGTTCTTTTTACCTTGAGAACAATGACCAATCTTCATTATACAATAAAGGAAGTACCTATTGTGATATCAATGATCATCAAAGGACTCAAACAAATGATGGTTCTTCACCTTCAAATACCAATGTTGGTCATGCAGACACTTGTTTTCCCTTCTTGATGAGTGAGGGAGTAAATCTGTGGGAGAATTATGGGTAG 1653 0.4114 MNMEHHHHHDYDHQENYAITDLRQLISEPSSAGNFTSIPLPPQPTAELFPSHHRNLTPLHQQHYEMMMFGRDIMPCTTDSVAPTRGIIVGHVATTTTASASTPPLSGGVEAETAFCNGGDASTGRWPRQETLTLLDIRSRLDVKFKEANQKGPVWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKARRQDGKHYRFFRQLEALYGQNINHSSIPETNFCSNIPFNTSKINTPYQANHENCCLSFNNSTDFDTSSSDDDDNDHNNSVEGLMEINNESMLEKRRNKRKSGRSWKVKIEDLIDSQMRKLMEKQEEWLDKLMETMEQKEKERVLREEEWRKQEVNRLEREHKFWAKERAWIEARDVALIESLQQLTGRKIKGSETHEGVEVAAEMRNNNENQNEDGIEILNGTVKVGDCWKETEITRLQQLRSEMETWEEIANKMTYYGYERTPLMCKQKWESISRNYYNKEGNKKKKENSRCSFYLENNDQSSLYNKGSTYCDINDHQRTQTNDGSSPSNTNVGHADTCFPFLMSEGVNLWENYG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0984 550 Coils Coil 425 445 - -
Lal24g0984 550 Coils Coil 300 342 - -
Lal24g0984 550 SMART sant 420 471 IPR001005 -
Lal24g0984 550 SMART sant 122 185 IPR001005 -
Lal24g0984 550 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 40 544 - -
Lal24g0984 550 PANTHER - 40 544 - -
Lal24g0984 550 ProSiteProfiles Myb-like domain profile. 424 469 IPR001005 -
Lal24g0984 550 Pfam Myb/SANT-like DNA-binding domain 125 211 IPR044822 -
Lal24g0984 550 Pfam Myb/SANT-like DNA-binding domain 423 492 IPR044822 -
Lal24g0984 550 ProSiteProfiles Myb-like domain profile. 118 183 IPR001005 -
Lal24g0984 550 Gene3D - 417 475 - -
Lal24g0984 550 Gene3D - 126 188 - -
Lal24g0984 550 CDD GT1 125 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0984 Lal-Chr24 8448233 8452629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0984 125 550 Trihelix Transcription Factor Family AT5G03680 48.408 3.22e-125 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal24g0984 Myb_DNA-bind_4 3.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0984 - - lang:109335088 783.482