Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0961 ATGAAGGTGATCGCTGCTTATTTGCTAGCCGTGCTTGGAAACAACAAAAACCCTTCTTCAAAGGATATCAAAAGCATCCTTGCCTCTGTTGGAGCTGAAGCAGATGATGATAGGATTGAACTGCTTTTATCTGAAGTTAAGGGTAAAGATATAGAAGATATTATTGCTTCTGGTAGGGAAAAGCTAGCCTCCGTGCCCGCTGGTGGTGGTGCTGTTGCAGTTGCTGCTGCTCCTGGTGGAGGCAGTGGTGGTGGTGCTGCTCCAGCAGCTGCTGAGTCTAAGAAGGAAGAGAAGGTGGAAGAGAAAGAGGAGTCTGACGATGATATGGGCTTCAGTCTCTTCGATTAA 348 0.4713 MKVIAAYLLAVLGNNKNPSSKDIKSILASVGAEADDDRIELLLSEVKGKDIEDIIASGREKLASVPAGGGAVAVAAAPGGGSGGGAAPAAAESKKEEKVEEKEESDDDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0961 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lal24g0961 115 Gene3D - 1 59 IPR038716 -
Lal24g0961 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Lal24g0961 115 MobiDBLite consensus disorder prediction 76 115 - -
Lal24g0961 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lal24g0961 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 115 - -
Lal24g0961 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0961 Lal-Chr24 8187113 8189079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0961 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 70.000 2.09e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0961 K02943 - qsu:111996733 122.864