Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0951 ATGAACCATCTTCATCTTATTATCATGAAATTGTTCATCTTTTTAATCTTCACACCATATCTCACACTAAGCCTACACCATAATGACACTAATGCCCTCACCCTCTTCCGTCTTCAAACCGACCTCCACGGCTCCCTCCTCCGTAACTGGACCGGCAGCAACGCCTGCTCCACCGCATGGCACGGCGTCCGTTGCTCCTCAAACAACCGAGTCATCTCCCTCTCCCTCCCTTCCCTCAACCTCCGGGGAACTCTCGACCCTCTCACTGCCCTCACCCACCTCCGCCTCCTTGACCTCCACGACAACCGCTTAAACGGTACCGTTTCTTCCATCCTAACGAACTGCACTAACCTCAAACTCATATACCTCGCCGGAAATGACCTCTCCGGTGAGATACCGGAGGAAATAGCCTCTGTCAATGGCCTTCTCCGCCTTGACCTCTCCGACAATAACTTACGTGGCATAATTCCAAAGGAGATTTCGAAGTTGCATTACCTTCAGACATTGAGGTTGCAAAACAACGTTCTCACTGGTTTTATACCTGACCTTTCAGCTTCCATGGTCAACCTCAGAGAACTGAACATGACTAACAACGATTTCTATGGACAGATACCTGAAACCATGCTCAAGAATTTCGGGGATGTGAGCTTTTCCGGCAATGAAGGTTTATGTGGTGCAACTCCATTTCCAGCTTGTTCATTTACAAACACTTCAAACCCATATCCATCTTCTCCCGAACCAGACCAAACTCAAACGGTTCCATCAAACCCAAGCTCATTGCCACTGACAAGCGTGGTAGCCAGACCCAGAACCCAAACTCACAACAAAACATTGAGCCCAGGAGCCATTGTAGCCATTGTGGTTGCAAACTGTGTAGCACTACTTGTGATAACATCATTCATTGTAGCTCATTGTTGTGCAAGAGGTAGAAGAAGCTCAAACTCTATGGTAGGAAATGAAGGAGGAGGTGGGAAAAGAAAGAGTGGAAGCAGCTATGGAGGTGATAATAAGGTATATAATGCAAATAATGGTGCTGGTGGTGGTGTTGAAGATAGTGATGGAACAAGTGGAACTGATAGGAGCAAGCTTGTGTTTTTTGATAGGAGGAGTGGGTTTGAGTTGGAAGATTTGTTGCGTGCTTCAGCTGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTGTATAGGGCAGTGCTTGATGATGGAAGCACTGTGGCTGTGAAGAGGCTTAAGGATGCTAACCCTTGTGCTAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAGAACCCTAACATTGTTAGACTTAGAGCTTATTATTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTTCCTAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCAGGAAGAATTCCATTAGATTGGACTACAAGAATAAGCTTGATGTTAGGGGCAGCTAAAGGCCTTGCTCGGGTTCATGCAGAGTACAGTGCAGCCAAAGTGCCACATGGGAATGTGAAATCATCCAATGTACTTCTTGACAAGAATGGTGTTGCATGCATCTCTGACTTTGGTTTATCATTGCTGTTAAACCCTGTTCACGCAATCGCGAGATTAGGAGGATACAGGGCTCCTGAACAAGCAGAAACAAAGAGGCTGTCTCAGCAAGCAGATGTGTACAGTTTCGGCGTGTTGCTATTGGAAGTTCTTACAGGTAAAGCTCCCTCATCACAGTACCCTTCACCGGCTCGGCCTCGAATGGATGAAGAGGAACAAGGAGCCTTGGATCTTCCCAAATGGGTTCGGTCCGTTGTGAAGGAAGAGTGGACAGCAGAGGTGTTTGATCAAGAACTCTTGCGCTACAAGAACATTGAGGAAGAGCTTGTGTCCATGCTGCATGTGGGGTTAACTTGTGTGGTGCTACAGCCAGAGAAAAGGCCAACCATGGCAGAAGTTGTCAAGATGATTGAGGATATTCGGGTGGAGCAATCTCCTCTCGGAGAGGACTACGATGAATCACGCAATTCGCTTTCACCTTCCCTTCCCACCACTGAAGATGGTCTAGCTTAA 2076 0.4687 MNHLHLIIMKLFIFLIFTPYLTLSLHHNDTNALTLFRLQTDLHGSLLRNWTGSNACSTAWHGVRCSSNNRVISLSLPSLNLRGTLDPLTALTHLRLLDLHDNRLNGTVSSILTNCTNLKLIYLAGNDLSGEIPEEIASVNGLLRLDLSDNNLRGIIPKEISKLHYLQTLRLQNNVLTGFIPDLSASMVNLRELNMTNNDFYGQIPETMLKNFGDVSFSGNEGLCGATPFPACSFTNTSNPYPSSPEPDQTQTVPSNPSSLPLTSVVARPRTQTHNKTLSPGAIVAIVVANCVALLVITSFIVAHCCARGRRSSNSMVGNEGGGGKRKSGSSYGGDNKVYNANNGAGGGVEDSDGTSGTDRSKLVFFDRRSGFELEDLLRASAEMLGKGSLGTVYRAVLDDGSTVAVKRLKDANPCARHEFEQYMDVIGKLKNPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLMLGAAKGLARVHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQAETKRLSQQADVYSFGVLLLEVLTGKAPSSQYPSPARPRMDEEEQGALDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLTCVVLQPEKRPTMAEVVKMIEDIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0951 691 SUPERFAMILY L domain-like 28 217 - -
Lal24g0951 691 Pfam Protein kinase domain 383 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0951 691 ProSiteProfiles Protein kinase domain profile. 379 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0951 691 Gene3D Ribonuclease Inhibitor 22 91 IPR032675 -
Lal24g0951 691 Gene3D Ribonuclease Inhibitor 92 240 IPR032675 -
Lal24g0951 691 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 682 - -
Lal24g0951 691 SUPERFAMILY Protein kinase-like (PK-like) 383 658 IPR011009 -
Lal24g0951 691 MobiDBLite consensus disorder prediction 666 691 - -
Lal24g0951 691 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lal24g0951 691 Pfam Leucine rich repeat 142 200 IPR001611 GO:0005515
Lal24g0951 691 CDD STKc_IRAK 385 661 - -
Lal24g0951 691 MobiDBLite consensus disorder prediction 237 262 - -
Lal24g0951 691 MobiDBLite consensus disorder prediction 312 358 - -
Lal24g0951 691 Gene3D Phosphorylase Kinase; domain 1 356 454 - -
Lal24g0951 691 PANTHER LRR RECEPTOR-LIKE KINASE 7 682 - -
Lal24g0951 691 Gene3D Transferase(Phosphotransferase) domain 1 455 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0951 Lal-Chr24 8049903 8053845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0951 22 687 Receptor kinase-like Gene Family AT2G36570 67.254 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal24g0951 Pkinase 2.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0951 - - gmx:102660494 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0951 24 8049903 8053845 Lal24g0951 24 8049903 8053845 ECH
Lal1g1778 1 20155986 20162190 Lal24g0951 24 8049903 8053845 PCT
Lal24g0951 24 8049903 8053845 Lal1g1778 1 20155986 20162190 PCT