Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0948 ATGGAACCCAATGGAGTAAGTGGTGGAATGTTTTCAAGCATGGCTAATGCTGGATTGCTTGGAGTTGAAAACCCTTTGCAGCAACAACAACAACAAAGTCTCACAAATCCTCAAAATTCTCACCTTTTGGTTCATCAACAAATGGTTTGTTTTGCGAATTCCAATCAAGGGAATGAACAACAGCATCAGAATCAATCAATGAAAAATGGGTACCCTCCATTTGGAGCTAAGAAACAACAAAGCACAACTACTATGAGTGATGAAGATGAAGCAGGAATAGGAGTAGGAGTAGCAGTAGATGATAATAACAACAACAATAGTCCAAAGATGAAGGCTTTTTCATCACCATGGCAGAGAATGAAGTGGACTGATACAATGGTTAGGCTCTTGGTAATGGCTGTTTATTACATTGGTGATGAATGTGGTGGTTCTGATGCTACTGATGCTAATGGAAAGAAAAAGTCCAATGGTGGTTTGTTGCAGAAGAAAGGGAAGTGGAAATCAGTGTCAAGGGCTATGATGGAGAAAGGGTTTTATGTGTCTCCACAGCAGTGTGAGGATAAGTTCAATGACTTGAATAAAAGATACAAGAGGGTGAATGATATTCTTGGAAAAGGAACAGCTTGCAGGGTTGTGGAAAATCAGAACTTGTTGGATACAATGGAGTTGGCACCAAAGTTGAAAGAAGAAGTTAGAAAATTGCTCAATTCAAAGCACCTTTTCTTCAGAGAAATGTGTGCTTACCATAATAGTTGTGGCCATGGGGGTGGTTGTGGTGATAATCTTCCACAACAGCAAGTTGAGGTTGGGATAGAGGTATCTCTGGCTGCTCAACAAGCACAACAGAAAAAGGGGTGTCCTCATTCATCAGAGAATGGAGGGGTTAATTTTGGTGGGACAGGACAAGAGGGTATGAAAATGTTGAAAGTTGGAAATTGCAAAGAGAATTATGAAGTTGATCATGATCATGATAATGATAATGATGATGATTCTGATGATGGGTCAAAGGATGTTTCTGATGAGGATGGAAATGAATCAGGAGATGGTGGTTCAAGGGGTAATCATGGACAAGAAGATGAGGATGAGAATGATAGAGGACCATTGAGGAAGAAGCCAAGAATATCCTCAGGACTAGGACTAGGACTAGGACTAGGACTAAGATTAGGGTCAGGATTAGAATCAGGGTTTTCTATGCAATCCAAGTTAATGCAGCAATTAAACAGTGAGGTAACTAATGTGTTCCAAGATGGAGGTAGAGGTCCTTGGGAGAAAAAACATTGGATGAGGCTTAGGATATTGCAGTTAGAGGAGCAGCAAATAAAGTATCACAGTGAAGCATTTGAGCTTGAGAAGCAGAGGTTGAAATGGGTAAGGTTTAGCAGCAAGAAAGAGAGGGACATGGAAAGAGCCAAACTTGAAAATGAAAGGAGAAAATTGGAAAATGAGAGAATGGTTTTGCTCATAAGGCAAAAGGAGCTTGAATTGGTGAAGCTTCTTAGGCAGCAGCAACATTCTTTAACCTAG 1524 0.4035 MEPNGVSGGMFSSMANAGLLGVENPLQQQQQQSLTNPQNSHLLVHQQMVCFANSNQGNEQQHQNQSMKNGYPPFGAKKQQSTTTMSDEDEAGIGVGVAVDDNNNNNSPKMKAFSSPWQRMKWTDTMVRLLVMAVYYIGDECGGSDATDANGKKKSNGGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDTMELAPKLKEEVRKLLNSKHLFFREMCAYHNSCGHGGGCGDNLPQQQVEVGIEVSLAAQQAQQKKGCPHSSENGGVNFGGTGQEGMKMLKVGNCKENYEVDHDHDNDNDDDSDDGSKDVSDEDGNESGDGGSRGNHGQEDEDENDRGPLRKKPRISSGLGLGLGLGLRLGSGLESGFSMQSKLMQQLNSEVTNVFQDGGRGPWEKKHWMRLRILQLEEQQIKYHSEAFELEKQRLKWVRFSSKKERDMERAKLENERRKLENERMVLLIRQKELELVKLLRQQQHSLT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0948 507 MobiDBLite consensus disorder prediction 55 84 - -
Lal24g0948 507 MobiDBLite consensus disorder prediction 317 376 - -
Lal24g0948 507 Pfam Myb/SANT-like DNA-binding domain 119 247 IPR044822 -
Lal24g0948 507 Gene3D - 122 198 - -
Lal24g0948 507 MobiDBLite consensus disorder prediction 280 300 - -
Lal24g0948 507 PANTHER F16F4.11 PROTEIN-RELATED 1 505 - -
Lal24g0948 507 Coils Coil 462 489 - -
Lal24g0948 507 MobiDBLite consensus disorder prediction 322 339 - -
Lal24g0948 507 MobiDBLite consensus disorder prediction 280 297 - -
Lal24g0948 507 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 505 - -
Lal24g0948 507 MobiDBLite consensus disorder prediction 340 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0948 Lal-Chr24 7997587 7999110 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal24g0948 Myb_DNA-bind_4 5.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0948 - - gmx:100816661 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1037 12 9634498 9635970 Lal24g0948 24 7997587 7999110 LSH
Lal1g1781 1 20182795 20184225 Lal24g0948 24 7997587 7999110 PCT
Lal24g0948 24 7997587 7999110 Lal1g1781 1 20182795 20184225 PCT