Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0940 ATGGAACTCTCTCTGTTCCTCCATTCTCCTCTTACCTTGACAAGAACACACAAAAGACTTGAACAAAAAAGTTCATATAGGTTACAATGCCAGTGCTCATATTCTTCATCAAATAACACTATTCAACAACCAGCCACACTGTCTTTACAGATTGAAGGAAGGAGGGCATTGCTTAGTTCTCTCCTTACAACTATTGCTGGAGTCTATGCATGTGATGTAGCTGAGGCCGTTAGCACAAGTAGAAGAGCGCTGCGAGGAGCGAAAATTCCTGAAAGTGATTTCGTAACCCTGCCGAATGGTCTGAAGTACTATGATTTGACGGTTGGAAATGGAGCTGAGGCTGTAAAAGGATCTCGTGTCGCAGTTCACTATGTTGCTAAATGGAGGGGTGTCACCTTCATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTTGGCGAATCTGAGAGAGGAAATGTCCTTAAAGGATTGGATTTCGGAGTACAAGGCATGCGAGTAGGAGGTCAGCGACTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAAGGAGTTCAAGAAATCCCTCCAAATGCTACAATAGAGTTGGATGTTGAACTGCTTTCTATCAAACAAAGTCCATTTGGGACTGCTGTAAAGATTGTTGAAGGTTAA 675 0.4356 MELSLFLHSPLTLTRTHKRLEQKSSYRLQCQCSYSSSNNTIQQPATLSLQIEGRRALLSSLLTTIAGVYACDVAEAVSTSRRALRGAKIPESDFVTLPNGLKYYDLTVGNGAEAVKGSRVAVHYVAKWRGVTFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDFGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGTAVKIVEG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0940 224 SUPERFAMILY FKBP-like 79 211 - -
Lal24g0940 224 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 113 208 IPR001179 GO:0003755
Lal24g0940 224 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 117 211 IPR001179 GO:0003755
Lal24g0940 224 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 10 224 - -
Lal24g0940 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 10 224 - -
Lal24g0940 224 Gene3D - 73 218 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0940 Lal-Chr24 7845894 7850925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0940 147 210 Calmodulin-binding Proteins AT5G48570 36.765 9.64e-07 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0940 24 7845894 7850925 Lal24g0940 24 7845894 7850925 ECH