Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0936 ATGTCAATCTCTGGTCCTTTTACATTTTCCTGGCACTTCAATTTCGAACTGCGAATTTCTCACTTTCTCACTCTCATTCCATCTGTTATCTCCTTTCCCACTATGTCAGAACCAAACCCCGCCGACACCGCGCCGCTAACAGCGCCGCCACCGTCTCATAAGAGTTGGGCCGACGAAGCAGACGAAGAATCAAACGCAACGGCGTCGTCCAGTTTAGCACCACCACAAACCTCATCACTAGAAGTTGACGAATTAACCATCGACGATAACAAGAAACCCCCAAAGCTGTTAGACGATCCCGACGATTCCAACATCCAAACGGTTACGTCAGGGGAAACGCCGTACACGTCAGCGGCGACGTTCGAAGATTTGAATCTGTCGCCGGAACTTCTGAAGGGTTTATACGTGGAGATGAAGTTTCAGAAGCCTAGTAAAATTCAAGCTATAAGCTTGCCTATGATTTTGAACCCTCCTCATAGGGATTTGATTGCACAGGCGCATAACGGTTCTGGAAAGACGACTTGCTTTGTGCTTGGGATGCTTAGTCGCGTTGATCCTAAGCTTCAGGGTCCTCAAGCTCTCTGCATTTGCCCCACTAGGGAGTTAGCTATTCAGGGCCTTTACATTCCTGCGTCCTTACAGTACCATCTGCTTGAACTTCAGCCTTGTCCTCAAGGCTGTAAACTGAAGTACTGGGCATTGATTTTTAGTTTGGAACAACAGTACTAA 729 0.476 MSISGPFTFSWHFNFELRISHFLTLIPSVISFPTMSEPNPADTAPLTAPPPSHKSWADEADEESNATASSSLAPPQTSSLEVDELTIDDNKKPPKLLDDPDDSNIQTVTSGETPYTSAATFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILNPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKLQGPQALCICPTRELAIQGLYIPASLQYHLLELQPCPQGCKLKYWALIFSLEQQY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0936 242 MobiDBLite consensus disorder prediction 62 83 - -
Lal24g0936 242 MobiDBLite consensus disorder prediction 84 99 - -
Lal24g0936 242 PANTHER DEAD-BOX HELICASE DBP80 98 220 - -
Lal24g0936 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 205 IPR027417 -
Lal24g0936 242 Gene3D - 97 215 IPR027417 -
Lal24g0936 242 MobiDBLite consensus disorder prediction 40 111 - -
Lal24g0936 242 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 153 205 IPR014001 -
Lal24g0936 242 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 119 148 IPR014014 GO:0003724
Lal24g0936 242 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 98 220 - -
Lal24g0936 242 Pfam DEAD/DEAH box helicase 145 205 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0936 Lal-Chr24 7826541 7828321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0936 101 216 Eukaryotic Initiation Factors Gene Family AT3G19760 39.344 1.05e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0936 K18655 - gmx:100784739 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0936 24 7826541 7828321 Lal24g0936 24 7826541 7828321 ECH