Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0933 ATGGACACAATATTAGTGCCTCCATGGCTTGAGTCAGTTCTAAACACATCATTTTTCAATGTCTGCCTGATTCATGGAGATGCTGCAAGAAGTGAATGTAACATGTTTTGCCTTGACTGCAATTGTGATGCTTTTTGCTTTTATTGCCGTTCCTCAAGACACAAGGATCATCAAGTCATTCAGATAAGAAGATCTTCATATCATGATGTAGTAAGGGTGGCTGAAATTCAGAAGGTATTGAACATAAGTGGAGTTCAGACATATGTGATAAACAGTGCAAGAGTACTGTTTTTGAATGAGAGGCCTCAACCAAAATCTGGGAAAGGAGTTATTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTAGGTTCTGTTCTTTAGGTTGTAAGCTTGTAAGAATAAAGAGAAATGGGGATGCAAGTTTTGGTTTGGATGATAGAAATAATGCAATGGCAATGGAAGGAGGATCAAGACAACAAGAAGAGAAATTGCGTGAAGGCTCACAACAAGACATGTATCCGGGCACGCATCTTCCACCTACTTCAAATGCAAGGAGAAGAAAAGGAATTCCTCATAGGGCTCCTTTTGGTTCCTAA 606 0.3977 MDTILVPPWLESVLNTSFFNVCLIHGDAARSECNMFCLDCNCDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLNISGVQTYVINSARVLFLNERPQPKSGKGVIHICEICGRSLLDPFRFCSLGCKLVRIKRNGDASFGLDDRNNAMAMEGGSRQQEEKLREGSQQDMYPGTHLPPTSNARRRKGIPHRAPFGS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0933 201 Pfam PLATZ transcription factor 63 134 IPR006734 -
Lal24g0933 201 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 200 - -
Lal24g0933 201 SUPERFAMILY B-box zinc-binding domain 20 64 - -
Lal24g0933 201 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 200 - -
Lal24g0933 201 MobiDBLite consensus disorder prediction 151 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0933 Lal-Chr24 7796195 7799265 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal24g0933 PLATZ 7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0933 - - gmx:100809455 360.533