Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0901 ATGGTGAAACAAAAAAAGAAAAGGGAAGATGGGGAATCGTGGCTGAGTGTTCTAGAATATGATTTGTATGAAGAGAAGAACCCTTGGGAGATTTGGGAAGAAGCTTTTGAAGGGTCTAGGTATGATGGAAGAGAACTTTATATCTTCACCACTTTGAAGAAGAAATCCCTCAATGGCTCACGTTTTCTTCGCATCATTGGGTGTGGTTCTTGGGAAGCTGAAGACACTGGAAAAAAGGTTGCAGCAGAAGGGACAAGTCTATGTATTGGGTTGAAGAAACGTTTTAGGTTTGAAAAGAGTGGCACTCAACATGATGGTGGTTGGATTCTGCATGAATATAGCCTTGACCCATCTTTGCAAAACAATGATTCATCTGCCAATAATCATGTTCTATGCAGATTTAGAAAAAATGAGAGACATCATCAACAAAAACAAGATTCAAAAAGAACATGGGAGGGGATGAACACCAATACAGTTATTGACACAGTCACTACAAAAAAGAGGATCCTTGTTCTTGCACTTGCGGCCAACGGTGTAACTGTAACTACTGATATAAGTGCTCTCTCAGGGAAAAATATTCACGAAAGAGCAAGAAACCAAGAACAAAAGGAAGTGGTTGAAACTGAATCTCACTTAATGGAACAAGAAAACCATGATTGGTTGGATTCATTTACATTGGAATTGTTGGAAGGTCAACAACACTTGATCCAAGTAGAAAGGGAAAAAAATCTCTTGATTCCCAATGCATTCAAGTCTTTAATGGAGAGGATGGTCTTTAGATAA 783 0.387 MVKQKKKREDGESWLSVLEYDLYEEKNPWEIWEEAFEGSRYDGRELYIFTTLKKKSLNGSRFLRIIGCGSWEAEDTGKKVAAEGTSLCIGLKKRFRFEKSGTQHDGGWILHEYSLDPSLQNNDSSANNHVLCRFRKNERHHQQKQDSKRTWEGMNTNTVIDTVTTKKRILVLALAANGVTVTTDISALSGKNIHERARNQEQKEVVETESHLMEQENHDWLDSFTLELLEGQQHLIQVEREKNLLIPNAFKSLMERMVFR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0901 260 ProSiteProfiles NAC domain profile. 1 137 IPR003441 GO:0003677|GO:0006355
Lal24g0901 260 SUPERFAMILY NAC domain 13 136 IPR036093 GO:0003677|GO:0006355
Lal24g0901 260 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 220 - -
Lal24g0901 260 Gene3D NAC domain 2 143 IPR036093 GO:0003677|GO:0006355
Lal24g0901 260 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 220 - -
Lal24g0901 260 Pfam No apical meristem (NAM) protein 16 115 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0901 Lal-Chr24 7434085 7436272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0901 17 144 NAC Transcription Factor Family AT3G15500 34.586 1.13e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal24g0901 NAM 2.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0901 - - aprc:113871407 194.512