Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0898 ATGGCTTCTTCAGAAGTAGTTCTCCACCGCACACTCTCCCAATCAAACACCAAAGTATCAACCAGTGCCACCACCACTACCACCACTATCTCCGACGTTGCTAGAAGACCTTCCGCCACCTCCTCCCGTTCCACCAAGGACCGCCACACCAAGGTGAACGGTCGCGGCCGCCGCGTCCGAATGCCGCCCCTCTGCGCCGCTCGGATTTTCCAACTCACCCGTGAACTCGGCCACCGCTCCGACGGCGAGACTATCGAGTGGCTCCTTCGCCATGCCGAGCCTTCTATCATCGCCGCCACCGGAACTGGAACCGTCCCCGCTGAGTCGGTGACCACTGCCTCCGCCTCCGCTTCTTCAGTGCCGTCAGTTCCCTGCCATGTCCAGCCGATGTCCTCGGTTCCCGGCAGCCACGGGATGTTCGCCGCACTGGCGCTTCAACCGTCGCAGCCGACGTGTCGTCTTGACCTTTGCCAGCCTGCGATGGGGATAGAGTATGCCGTGGCTGCAAATGGGTACCGGCACATGCCGTTCACGGCACTGTTGTTGCAGCCGGCGCGGGCTGAGGATGCTCAGCAAGAAGAGAGTCTCAGTGAACAATGA 600 0.6133 MASSEVVLHRTLSQSNTKVSTSATTTTTTISDVARRPSATSSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAESVTTASASASSVPSVPCHVQPMSSVPGSHGMFAALALQPSQPTCRLDLCQPAMGIEYAVAANGYRHMPFTALLLQPARAEDAQQEESLSEQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0898 199 MobiDBLite consensus disorder prediction 1 40 - -
Lal24g0898 199 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 127 IPR005333 GO:0003700
Lal24g0898 199 MobiDBLite consensus disorder prediction 1 57 - -
Lal24g0898 199 Pfam TCP family transcription factor 44 123 IPR017887 -
Lal24g0898 199 ProSiteProfiles TCP domain profile. 45 99 IPR017887 -
Lal24g0898 199 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 27 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0898 Lal-Chr24 7402756 7403355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0898 45 184 TCP Transcription Factor Family AT2G37000 58.571 2.08e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal24g0898 TCP 6.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0898 - - cam:101510590 241.891