Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0897 ATGGCCTCTTGGAAGCGTCATTTGATCCATTGGTGTGGACTGTGGAGCAAAGCGTTAGAAGCCAGTAAGGAGCGTAAATCAAATGGAGTTTCAGTTCAGGTTGCAATGAAGTGTTTTGCATTCTACTATGGGAGGAAGAAGGATGATCAGAAGATCTTGCAATCAATGTCAGGTCGGTCTGAAATGAATTCTCTGTGTATATCAGACACTAGTTCAGACTCCCTCAGGAGGAATGCATTTCCTAGTTTCTCCCAAAGACCAAGCAACCTGAAAATATTTACTGTACTGGAACTGAAATCAGCTACAAAAAATTTCAGCCGCTCACTTATGCTTGGAGAGGGCGGGTTTGGGTGCGTCTACAAGGGATTGATTAATAGTGTAGACGACCCTTCCAGAAAAATTGTAGTTGCAGTTAAACAACTTGGTAAAAGTGGAACTCAGGCAAGAAGAGGTCATAAGGAATGGGTGACTGAAGTGAATGTTCTGGGAATTGTTGAACATCCCAATCTTATGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGCGCCTTCTGGTTTATGAATATATGCCCAACAAAAGCGTAGAATACCATTTATCCCCGCGAACTGAGACTCATCTGTCATGGAGTATGAGGTTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATTCTTTTGGATGAGCACTGGAATGCTAAGTTGTCGGACTTCGGATTAGCAAGATTGGGACCATCAGATGGGTTATCTCATGTCTCAACAGAGGTTGTCGGAACAATGGGGTATGCAGCTCCTGATTATTTTCAAACAGGGCGTCTCACGTCGAAGAGTGATGTATGGAGCTATGGTGTATTCCTTTATGAACTCATTACTGGCAGGCGTCCTATAGACCGAAACCGCCCCAAGGGTGAGCAGAAGATGTTGGAATGGATAAGACCATACCTTTCAGATGGGAAGAAATTTCAATTAATATTGGATCCAAGACTTGAGTGGAAACATGTCTCGAAGTCAGCCCAGAGACTTTCTGTAATAGCTAACCGATGCTTGGTCAGAAACCCAAAGAATCGGCCAAAGATGAGTGAGGTATTAGGAATGGTGAATCAGATTGTGGAGTCTTCAGTGAGTGCTAGTCCTCAGCCACCCTTGAAGAGTGTTACATCAGTTGAAACTTCCCAGGACACTGAAATACAGAAGAAATGGGTCGTTCGTCCAAAAACAGTTGATTGTAATTGGTTTAGGACATGGAGAACAAAGCTTATAAGAGCAAATTGA 1341 0.4258 MASWKRHLIHWCGLWSKALEASKERKSNGVSVQVAMKCFAFYYGRKKDDQKILQSMSGRSEMNSLCISDTSSDSLRRNAFPSFSQRPSNLKIFTVLELKSATKNFSRSLMLGEGGFGCVYKGLINSVDDPSRKIVVAVKQLGKSGTQARRGHKEWVTEVNVLGIVEHPNLMKLVGYCADDDERGIQRLLVYEYMPNKSVEYHLSPRTETHLSWSMRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPSDGLSHVSTEVVGTMGYAAPDYFQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWIRPYLSDGKKFQLILDPRLEWKHVSKSAQRLSVIANRCLVRNPKNRPKMSEVLGMVNQIVESSVSASPQPPLKSVTSVETSQDTEIQKKWVVRPKTVDCNWFRTWRTKLIRAN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0897 446 ProSitePatterns Protein kinases ATP-binding region signature. 111 139 IPR017441 GO:0005524
Lal24g0897 446 PANTHER OS01G0588500 PROTEIN-RELATED 59 437 - -
Lal24g0897 446 Gene3D Phosphorylase Kinase; domain 1 83 193 - -
Lal24g0897 446 SUPERFAMILY Protein kinase-like (PK-like) 82 388 IPR011009 -
Lal24g0897 446 Gene3D Transferase(Phosphotransferase) domain 1 194 407 - -
Lal24g0897 446 Pfam Protein kinase domain 110 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0897 446 PANTHER KINASE 1B 59 437 - -
Lal24g0897 446 ProSiteProfiles Protein kinase domain profile. 105 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0897 446 CDD STKc_IRAK 111 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0897 Lal-Chr24 7388175 7391848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0897 91 425 Glycoside Hydrolase AT3G07070 45.217 3.76e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal24g0897 Pkinase 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0897 - - gmx:100305438 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0897 24 7388175 7391848 Lal24g0897 24 7388175 7391848 ECH