Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0896 ATGGATCGGCAAGAATATTTGCGGAGGCATTCCAATATGAAATGCCAACAGGTTCAGGTGGATGAATCATTTGTACCTGTTCTTAAAGATGAAGAAATGGAAGTTGAGCATTTACTCGAAGAACATAGGAATGATCATATTTCAATGGACGGCAGTTTGGATTCTCATACAACTTTGAATGGCATGGATGATTTGGGACTGGAGGTATTGGTTTTGTCTATGTTCGGCACTTCCAGTTATTACGAGGATGATGTTGAAGCTAGAGTGCTTGATGGAATCCTGGATGATGTTGAAATCAATGATCTTGATGGAACTGATGCTTTCTCCGGTGAATGTGACAAGTATTTTTTGGATTTTGACTTTGTCGACAATCCTGAGGTACTAGGCTATGGTCTTTCTAAAGGTTCACTTTTGCAAAATTCAAGTTCGGAAAGTCATTCTTCAGGATTTAGTGGAAGTAGCATTGTTGGTGGGGTATCAGAATCAACGAAAGTACCCTTTGCGCAACCTGAATGCAAAAATGACTCTCCAGATGGTACAACAACCTATGAATCTTGTGATGCCTTAAGAAACAATCCAAGTCGGCCATCAAATGGAGATTCCATGTACGCCATTTCACTTGACATGAAGCATCTGCTTGAATTGAATAATGGTCACCCTTTAGCCGATGGTATATTATCATTTGAGAACGAAAAGGATGCTGTTGAAGAATGTCAGCCTTCTGCACTTAGAGAGAAGAGATTCCGTAAGCCTACAAAGAGGTATATTGAAGAGTTTTCAAATTTGAGGTCAAAGGAAAAGGTGCAGACTTCTGCTACAAAAAATAAAAATTCGAGTTTGTCATCATGTGATGAACTTAATGTGAGACCTAAAGCATTGGGAAAGATTCCAGGCGAGAAGTATAGTAATGAAAATAGTGATGTGACACTTCATGCTTTAAAAGTTAGCCGGGGACAACCAAAGAAAAAGAAACTTGAAAATGACAAGGAGCCGCTTAGCTCAGAGTCTGAGGATGAACCGAAAAGGAAAGATCGGAGAAAGAATCAGAAAATGTGGACTCTCCCTGAAGTGAAGAAGTTAGTTGATGGCATATCTGAATATGGAATTGGTCGGTGGACTAATATAAAGAGGTTTTTCTTTTCTTCTTCAACCTACCGAACACCCACAGATATAAGGGACAAGTGGCGTAATCTTTTAAGAGCCAGTTCTGCACAAAAATCTTACGACAAAGAGGCTGAGCAAAACGACGAGCTTGCCTTACGTCCCTTACCACTTGACGTGGTACACCGTGTGCGCGAATTGGCTAAAATTCACCCATACCCTAGGGCACGTGGCTCAAAGAAATCATCTGTTAGCAGTCTTGGCAAAAGAAATTTACAGAGGAAGAGGTGTTCTTAA 1398 0.4041 MDRQEYLRRHSNMKCQQVQVDESFVPVLKDEEMEVEHLLEEHRNDHISMDGSLDSHTTLNGMDDLGLEVLVLSMFGTSSYYEDDVEARVLDGILDDVEINDLDGTDAFSGECDKYFLDFDFVDNPEVLGYGLSKGSLLQNSSSESHSSGFSGSSIVGGVSESTKVPFAQPECKNDSPDGTTTYESCDALRNNPSRPSNGDSMYAISLDMKHLLELNNGHPLADGILSFENEKDAVEECQPSALREKRFRKPTKRYIEEFSNLRSKEKVQTSATKNKNSSLSSCDELNVRPKALGKIPGEKYSNENSDVTLHALKVSRGQPKKKKLENDKEPLSSESEDEPKRKDRRKNQKMWTLPEVKKLVDGISEYGIGRWTNIKRFFFSSSTYRTPTDIRDKWRNLLRASSAQKSYDKEAEQNDELALRPLPLDVVHRVRELAKIHPYPRARGSKKSSVSSLGKRNLQRKRCS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0896 465 Gene3D - 338 450 - -
Lal24g0896 465 SMART sant 348 401 IPR001005 -
Lal24g0896 465 MobiDBLite consensus disorder prediction 265 283 - -
Lal24g0896 465 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 352 403 IPR017930 -
Lal24g0896 465 CDD SANT_TRF 350 400 - -
Lal24g0896 465 MobiDBLite consensus disorder prediction 441 465 - -
Lal24g0896 465 MobiDBLite consensus disorder prediction 319 350 - -
Lal24g0896 465 MobiDBLite consensus disorder prediction 313 350 - -
Lal24g0896 465 SUPERFAMILY Homeodomain-like 351 415 IPR009057 -
Lal24g0896 465 Pfam Myb-like DNA-binding domain 351 399 IPR001005 -
Lal24g0896 465 ProSiteProfiles Myb-like domain profile. 344 399 IPR001005 -
Lal24g0896 465 MobiDBLite consensus disorder prediction 263 283 - -
Lal24g0896 465 PANTHER TRF-LIKE 8 8 463 - -
Lal24g0896 465 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0896 Lal-Chr24 7374649 7380202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0896 348 410 Single Myb Histone (SMH) Gene Family AT1G17520 40.909 7.88e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal24g0896 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0896 - - gmx:100810255 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0896 24 7374649 7380202 Lal24g0896 24 7374649 7380202 ECH