Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0873 ATGCAAAAAACTCTGTTCCTTCTTCTCCTTCTTCTCCTTCTCTGTGCCCCCGATACACATGGGTTTGGTACCATGGGACCAATCTCTGCATCGTTCGGAAAAGATGAGTTATTCTGTGCCATTGATGCTAGTGGTAAACAAAATATCATTTGCTGGGGAAAAAACACTACATCGCCTTTCTCATCACAATCTTCTTCATCATCTTCTTCTTCTTCCTCGTCTTACTTCACAAGCATCCCTGCCATGTCAGCACTATCGGGTGGAGAAGGATTTCTTTGTGGCATTTTAGCAAATACCTCGCAATCATATTGTTGGGAAGTTAGTACTACAACAACAACGATATCGAAGCCGGGTGCAGATCTTGTTTTGGTACCTCCGGCGTACCGGAACACTGCTTACTCTCACATCGCGGCGGGGAAGAATCACGTTTGCGCCGTTAGAGGATCGTACTTTGCCGATCATGATTCCGGAACCGTTGATTGCTGGGAACTGTCTAGAACATCTAACAACACGTTAATAGCGATACAGAGCAATTTGTTCAACGACCAATTTAGTAGAAACCTTGTACTAAACAAAATAGTTTCTGGCGAAGGGTTCACCTGCGGGGAGGTTCGAGATGGTGGGCTTGTTTGTTGGGGACCGAAATCTACCCAATTGGGTGTTTCCAATTCCAACATGACGGGAAGTTTTTCTGTTTTAGCATCGGGTAGAAGCTCAATTTGTGGAGTTACAAAAGGTTCGGGCGATTTGAAATGTTGGGGTGATCCGGGTTCATTTTCGAATCCTCCACCAACGGTTCAGTTAATTTCGCTTTCAGCTGGGTCTAACCATTTTTGTGGGATCCGGAAGGATAATCATGTAGTGGAGTGTTGGGGGAATTTGAATTCTTCAATGGTTCCTAAAGGTTATGGACTTATGGCTATTGCTTCTTCTGATTACACCACATGTGGTATAAGGGAAGAAGATCTTTTACTTGATTGTTGGTTGGTGAATGCTTCAAAAACCGATTTTGATCCACCGTTGGAACTTTCTAGTCCTGGTTTATGCAGGGGTAGTGAATGTAATTCTGGTGAGTTTGCTTTTAATGTGAGTGTGCTCAACGAGCCGGGTTTAACTAGTCTTTGTGTTAGACAGGATTTGAGGATTTGTTCCCCTTGTGGATCAAATTGTTCTCAAGGTTTCTTTCTGTCTAGCCCCTGTACTCAGAATTCGGATAGAGTTTGCATTGCTTGTTCTCTTTGCCAGAACAGTTCTTGTTATGATGTTTGTGGACTTCATTTTCATCACTCCTCGATTGAATTGCATTGGCATCATTTGCGTAGATTGGTTCTTATAATCGGGTCCTCTGCTTTGGGTTTCTTACTTATTTTGATTTGTTGGTGTGTCTTGCCGCGTTTGTTTGGCAATAAAGGGAAGAAGAAAAATTCCAAGTCTAGCATGGAGGAAGTTGAAGAGAATGTTGGTCTACATACTTCTCCTTCTATAGCTTCCTGTCCTGGGGTGCCTCAAGTTTTCAGGCTTTCAGAGCTGAAAGATGCAACAAATGGGTTTAAAGAGTTTAATGAGATTGGTAGGGGAAGTTATGGCTTTGTTTACAAAGCTGCTTTGGCAGACGGGAGAGTGGTTGCTGTTAAGAGAGCAAATGCCGCTACTATAATACACACTAATAACCGTGATTTCGAGATGGAGCTGGAAATTTTATGCAAAATCCGCCATTGTAATATTGTTAATTTGTTGGGCTATTGTGCTGAAATGGGGGAGAGGTTACTTGTTTATGAGTATATGCCTCATGGGACACTTAATGATCACCTACATGGTGGTCTTTCTCCTCTTAATTGGAGCCTCAGGTTAAAGATAGCAATGCAGGCTGCAAAGGGACTTGAGTACCTTCACAAGGAACTAGTCCCACCAATTGTTCATAAGGACCTCAAAAGTTCAAACATTCTTTTGGATTCAGAGTGGGGGGCTAGAATTGCGGACTTTGGACTTCTTGCATCAAGTGACAAAGTTCTTAATGGGGACCTTGAAAGCGATGTTTATAACTTTGGGATCGTTTTACTAGAGATTCTTAGTGGAAGAAAAGCTTATGACCGAGACTTTTCGCCTCCTGACCTGGTTGAGTGGGCAGTGCCTTTAATCAAACAAGGAAAGGCAGCTGCCATAATTGATCGGTATGTAGCACTTCCAAGAAATGTTGAGCCTTTGCTTAAGCTTGCTGATATAGCTGAGCTCGCAGTTAGAGAAAATCCGAGTCAGCGTCCACAAATGGTAGACATAGCATTTTGGTTGGAGCAAATTGTGAAAGATGGATTGATCTTATAG 2322 0.4268 MQKTLFLLLLLLLLCAPDTHGFGTMGPISASFGKDELFCAIDASGKQNIICWGKNTTSPFSSQSSSSSSSSSSSYFTSIPAMSALSGGEGFLCGILANTSQSYCWEVSTTTTTISKPGADLVLVPPAYRNTAYSHIAAGKNHVCAVRGSYFADHDSGTVDCWELSRTSNNTLIAIQSNLFNDQFSRNLVLNKIVSGEGFTCGEVRDGGLVCWGPKSTQLGVSNSNMTGSFSVLASGRSSICGVTKGSGDLKCWGDPGSFSNPPPTVQLISLSAGSNHFCGIRKDNHVVECWGNLNSSMVPKGYGLMAIASSDYTTCGIREEDLLLDCWLVNASKTDFDPPLELSSPGLCRGSECNSGEFAFNVSVLNEPGLTSLCVRQDLRICSPCGSNCSQGFFLSSPCTQNSDRVCIACSLCQNSSCYDVCGLHFHHSSIELHWHHLRRLVLIIGSSALGFLLILICWCVLPRLFGNKGKKKNSKSSMEEVEENVGLHTSPSIASCPGVPQVFRLSELKDATNGFKEFNEIGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLNDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARIADFGLLASSDKVLNGDLESDVYNFGIVLLEILSGRKAYDRDFSPPDLVEWAVPLIKQGKAAAIIDRYVALPRNVEPLLKLADIAELAVRENPSQRPQMVDIAFWLEQIVKDGLIL 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0873 773 Gene3D - 182 340 IPR009091 -
Lal24g0873 773 SUPERFAMILY Protein kinase-like (PK-like) 493 763 IPR011009 -
Lal24g0873 773 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Lal24g0873 773 Gene3D Transferase(Phosphotransferase) domain 1 672 770 - -
Lal24g0873 773 Gene3D Transferase(Phosphotransferase) domain 1 595 671 - -
Lal24g0873 773 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 25 771 - -
Lal24g0873 773 SUPERFAMILY RCC1/BLIP-II 47 322 IPR009091 -
Lal24g0873 773 ProSiteProfiles Protein kinase domain profile. 517 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0873 773 Gene3D Phosphorylase Kinase; domain 1 477 594 - -
Lal24g0873 773 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 353 408 IPR001368 GO:0005515
Lal24g0873 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Lal24g0873 773 SMART serkin_6 517 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0873 773 PANTHER OS01G0750732 PROTEIN 25 771 - -
Lal24g0873 773 Gene3D - 26 181 IPR009091 -
Lal24g0873 773 Pfam Protein kinase domain 517 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0873 Lal-Chr24 7128227 7130548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0873 22 765 Receptor kinase-like Gene Family AT3G59420 30.769 7.53e-110 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lal24g0873 Pkinase 1.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0873 - - gmx:100814476 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0873 24 7128227 7130548 Lal24g0873 24 7128227 7130548 ECH