Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0865 ATGGCCAACAAAGTCCCTCCCTCCTTCGATCGCATGGGAAAGGTGATTAAGGATTCTGGTTCCAAAGGGTTCAACCCAGGATTGATAGTTCTATTGGTAGTTGTTGGGTTGCTGCTGATATTCCTAGTCGGAAATTACGTACTCTACACGTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCACTCTCAAAGAAGAAGATGCAAAAGGAGAGAATGAAGAAAGGAGTCTCTGCACCCGGAGAGTAG 252 0.4603 MANKVPPSFDRMGKVIKDSGSKGFNPGLIVLLVVVGLLLIFLVGNYVLYTYAQKTLPPRKKKPLSKKKMQKERMKKGVSAPGE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0865 83 PANTHER DNA-BINDING PROTEIN S1FA2 2 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lal24g0865 83 Pfam DNA binding protein S1FA 20 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lal24g0865 83 MobiDBLite consensus disorder prediction 57 83 - -
Lal24g0865 83 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 2 83 - -
Lal24g0865 83 MobiDBLite consensus disorder prediction 59 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0865 Lal-Chr24 7043523 7045342 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Lal24g0865 S1FA 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0865 - - gmx:100499820 115.546