Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0862 ATGCTTTCTTCTTTTCTAGAATCTTCATTACTGACCAAAGAGATTATTTTAACACATGTTGAAGATGAAAACAATAATGTTCATGTTGTTGAAGTTGTAGCAACTGTCCTGGATGCTGAGGAACCTGATTCTCCTGTTCAGTCTGCAGTTGTTGAGGTTCAAGTCGCTGCAGTTGTTCAGATTTTCGGTAAACTAAACGACGATGTGGCTGCAACGAAGATTCAAACAGCTTTTCGGGGATACATAGCAAGACAATCGTTGTGGGCTTTAAGGGCGTTGGTCAGGTTGAAGTCACTTTTGGAAGGGCCAGTTGTTAAACGCCAAGCCATTAGTACCCTTCGCTCGATGTTGAATTTTGCTCATTTACAATCTCAGATTCATTCTAGGAGGCTCAGAATGTTAGATGAGAGTCAAGCTCTGAAGAAACATCTCTTACAGAAGCACACAAAAGAGCTAGAAAGCATGCGGGAATGGGATGAGAGCTTACAATCCAAAGAACAAATCGAAGCCAAGTTACTAAGCAAATATGAGGCTGTGACAAGAAGAGAAAGAGCACTGGCTTATTCATACTCTCAACGGGGACGAAAAGCTTCTATACCCTCTACTTTGTACCAAAGATACAGGAATGGAAATGTTTTATACCCTTTACCATCAATGAAAAATTGGCACCTCATTAAAAAATAA 684 0.402 MLSSFLESSLLTKEIILTHVEDENNNVHVVEVVATVLDAEEPDSPVQSAVVEVQVAAVVQIFGKLNDDVAATKIQTAFRGYIARQSLWALRALVRLKSLLEGPVVKRQAISTLRSMLNFAHLQSQIHSRRLRMLDESQALKKHLLQKHTKELESMREWDESLQSKEQIEAKLLSKYEAVTRRERALAYSYSQRGRKASIPSTLYQRYRNGNVLYPLPSMKNWHLIKK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0862 227 ProSiteProfiles IQ motif profile. 67 95 IPR000048 GO:0005515
Lal24g0862 227 PANTHER IQ-DOMAIN 5-RELATED 14 202 - -
Lal24g0862 227 Pfam IQ calmodulin-binding motif 70 86 IPR000048 GO:0005515
Lal24g0862 227 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 14 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0862 Lal-Chr24 7006378 7012489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0862 3 222 IQD Protein Family AT5G03040 44.444 6.07e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0862 - - gmx:100801847 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0933 12 7857020 7861919 Lal24g0862 24 7006378 7012489 LSH
Lal11g1146 11 15173882 15177489 Lal24g0862 24 7006378 7012489 PCT
Lal1g1828 1 20607535 20611714 Lal24g0862 24 7006378 7012489 PCT
Lal20g0082 20 536142 540096 Lal24g0862 24 7006378 7012489 PCT
Lal24g0862 24 7006378 7012489 Lal11g1146 11 15173882 15177489 PCT
Lal24g0862 24 7006378 7012489 Lal1g1828 1 20607535 20611714 PCT
Lal24g0862 24 7006378 7012489 Lal20g0082 20 536142 540096 PCT