Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0851 ATGAACTCCAACACTTGCAATTCTTCTTCTAACTCAATGGAAACATCATCAACTACAACAACTACACCCTCTGATTCTTCTGCCAAAAAGGTTAGAAAGCCTTATACTATTACCAAGTCTAGAGAAAGCTGGAGTGATGAAGAACATGACAAGTTTCTTGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAATCGGTTATTCAGATTCGAAGCCATGCCCAAAAATACTTCTTGAAAGTTCAAAAGAACGGGACGATGGCACATGTGCCTCCTCCTCGTCCTAAGCGCAAAGCCACTCATCCTTACCCGCAAAAGGCATCGAAAAATGTTTTGATGCCACTGCCAGCATCCATTGCTTTTGCTTCTTCGATCCTTACACCTGGGTATGCCACTTGGGGTGAAACTTCCCTGCTGATGAATGCTGGATCAGATCAATCGATGACTTGTGAAAAAGAACTCGGCAATCTTCACGGAAATGAAGGCATGCATACTTCTTTTACTGTTATTTGTTTGATGTCATTGTCAATTGTCTACATTGGCTGTACTAAACGGAACTTTCCGACACTTATTATGTTATATGATATTACTTATTCAGCTGATATTGGAATAAAGGGGATAACACAGATCGGCAACATCAATCTCAGTGTTGTTGGGAACTCTAATAGAACGGTACTAACTTCTGAGATACAAAATCAAGGGAAACAAGCTCCAGTACTTCATGGTTTGCCCGACTTTGCTGAAGTTTATAGCTTCATTGGAAGTGTTTTTGATCCAGAATCAAATGGCCATGTCCAAAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGCTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGACTTTGAGCCCATTAAGAATGTATTGTCAACATATGATGACAATACCTTGGAAGGTGGAGTTACTTCAGGAATTGATGCCAAGAAGCAACCAAATAATCTCTCTTGTCAAAGTTCTTAA 1023 0.393 MNSNTCNSSSNSMETSSTTTTTPSDSSAKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKSVIQIRSHAQKYFLKVQKNGTMAHVPPPRPKRKATHPYPQKASKNVLMPLPASIAFASSILTPGYATWGETSLLMNAGSDQSMTCEKELGNLHGNEGMHTSFTVICLMSLSIVYIGCTKRNFPTLIMLYDITYSADIGIKGITQIGNINLSVVGNSNRTVLTSEIQNQGKQAPVLHGLPDFAEVYSFIGSVFDPESNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPDFEPIKNVLSTYDDNTLEGGVTSGIDAKKQPNNLSCQSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0851 340 PANTHER PROTEIN REVEILLE 8 8 197 - -
Lal24g0851 340 PANTHER PROTEIN REVEILLE 8 216 333 - -
Lal24g0851 340 PANTHER SWI/SNF COMPLEX-RELATED 216 333 - -
Lal24g0851 340 PANTHER SWI/SNF COMPLEX-RELATED 8 197 - -
Lal24g0851 340 MobiDBLite consensus disorder prediction 1 33 - -
Lal24g0851 340 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
Lal24g0851 340 Pfam Myb-like DNA-binding domain 41 86 IPR001005 -
Lal24g0851 340 Gene3D - 44 91 - -
Lal24g0851 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Lal24g0851 340 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 88 IPR006447 GO:0003677
Lal24g0851 340 SMART sant 40 88 IPR001005 -
Lal24g0851 340 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Lal24g0851 340 MobiDBLite consensus disorder prediction 1 41 - -
Lal24g0851 340 CDD SANT 43 86 IPR001005 -
Lal24g0851 340 ProSiteProfiles SANT domain profile. 39 92 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0851 Lal-Chr24 6896334 6900016 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal24g0851 Myb_DNA-binding 1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0851 - - adu:107474168 441.81