Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0846 ATGGTTAGATCATGCTGGAAACCTTCTGTAGAGGGTGATGATGGAGATGAGAGTGGAAGAGTTGAAGGATTGTTATGGTATAAAGATTTTGGGAACCATCTTTATGGAGAATTCTCAATGGCTGTTATTCAAGCAAATAGTTCATTAGAAGATAGAGGTCAACTTGAATCTGGACCATTGAGTTCCAACCATTTGGGTCCTCAAGGGACTTTTATAGGTATCTATGATGGTCATGGTGGAACTGAGGCCTCACAATTTGTCAGTGACAATCTTTTCTGCAATCTCAAGAGGCTTGCAGGTGAACATCAAGGCATGTCAGAAAATGTTATAAAAAGGGCATACTCAGCAACAGATGAAGGGTTTCTATCTCTTGTGAAGAAACATTGGCTAAGTAAGCCACATATTGCATCCACAGGTACTTGTTGTTTGGTGGGGATAATTTGCAATGACATGTTATATATTGCAAATTCTGGAGACTCCAGAGCTGTGTTAGGAAGAGTAGAGAGAGCAACAAAGGAAACATCAGCTATACAATTATCCACAGAACACAATGTTAATCAAGAAACAATGAGAAATGAAATTCGCTCAAAGCACCCATATGATTCTCAAATAGTGGTCATGAGACACAATGTTTGGCGTGTGAAAGGCCTCATTCAGGTATCAAGGTCCATAGGTGATGCATATCTGAAGAAAGCAGAATTTAACAAGGATCCTCTACCATCTAAGTATAAGCTACGTGAAACATTCTTCAAACCAATTCTTAGTTGTGAGCCATCAATATCAACACATAAACTCCACCCTAATGACCAATTTCTCATATTTGCTTCTGATGGTCTATGGGAACATCTTACCAACCAAGAAGCTGTTAACATAGTCACCAATAACCCACCTAATGGAATTGCTAAGAGACTTGTGAAATCTGCACTAAGAGAAGCAGCTAAGAAGAGAGAAATGAGATTTTCAGATCTCCAAAAGATTGAACAAGGAGTAAGGAGACACTTCCATGATGATATAACAGTAATTGTTGTGTATCTAAATCCAAGAATGAGTGATAATAACAATTCCTCTCATTGGGGTTCTCCTCTCTCAATCAAGGGAGGTGATCCAGGTTACGGTTACTAG 1122 0.3895 MVRSCWKPSVEGDDGDESGRVEGLLWYKDFGNHLYGEFSMAVIQANSSLEDRGQLESGPLSSNHLGPQGTFIGIYDGHGGTEASQFVSDNLFCNLKRLAGEHQGMSENVIKRAYSATDEGFLSLVKKHWLSKPHIASTGTCCLVGIICNDMLYIANSGDSRAVLGRVERATKETSAIQLSTEHNVNQETMRNEIRSKHPYDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKKAEFNKDPLPSKYKLRETFFKPILSCEPSISTHKLHPNDQFLIFASDGLWEHLTNQEAVNIVTNNPPNGIAKRLVKSALREAAKKREMRFSDLQKIEQGVRRHFHDDITVIVVYLNPRMSDNNNSSHWGSPLSIKGGDPGYGY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0846 373 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Lal24g0846 373 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Lal24g0846 373 PANTHER ALPHABET, ISOFORM E-RELATED 3 369 - -
Lal24g0846 373 SUPERFAMILY PP2C-like 46 347 IPR036457 -
Lal24g0846 373 CDD PP2Cc 35 345 IPR001932 -
Lal24g0846 373 Pfam Protein phosphatase 2C 58 314 IPR001932 -
Lal24g0846 373 SMART PP2C_4 31 343 IPR001932 -
Lal24g0846 373 Gene3D - 28 356 IPR036457 -
Lal24g0846 373 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0846 Lal-Chr24 6851732 6855192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0846 1 367 PP2C-type Phosphatase Gene Family AT3G12620 63.514 2.85e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0846 K01102 - gmx:100819870 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0846 24 6851732 6855192 Lal24g0846 24 6851732 6855192 ECH