Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0828 ATGGATGAGCTCAATCATGAAAACACATTGATAGGTTCAAAAACAAGTGTTGATGTTCTATTCAAGGCTGCAATGAACAAAGGGATGAGCAACTATGTTCTCGTCGTTTATCGCCACGCTGTTGCATTCATTGAAAGTAAGGCCAAAGATGACAATGTCAATCTTCATGAAGATAGTAGCACTCAGCTTGCTAGATACACAACAGCAACCTTTGCTGCTGCTATGACCAATATAATTCCTGCAATTACCTTCTGCATGGCATATATCCTTGGGCTTGAGAAGATAAAAATAAGAAGTATACGCAGTCAAGCAAAAGTTATTGGAACTCTAGTAGCTGTTTCTGGAGCCATGGTCATGACATTGATGAAAGGTCCATTACTTGGGGCTTTGGGGACACACATAGGGGACAACCACAACCACAACCAGCAGCATAATAATGGGACAAATATTCAACATACTATAAAGGGAACCATTATGATCATAACTGGATGCTTTAGTTGGTCTTGTTTTGTTATCCTCCAAACGTTTCGTGGTAGTGTCTTAATTGTGCAAGTAGACTATCAACTACGTCGTCCCAAGGATAAAACAATTCAGTTCCCTTCTATTACCCTTGACACCTACCCTGCTGAGCTTTCTCTTACATCATGGATATGCCTATTGGGATCACTTGAAGGTGCTGTAGTGGCTATGATTATGGAAAGAGGCAACCCTTCAGTTTGGTTTGTGAAATGGGATATTAAATTGGTGGCTATTATCTACAGTACTGCATCACTTGATGTGATCGCAATATTGCGGTTTACGGGTATAGTTGGTTCAGGACTGGCTTATTACGTGCAAGGAGTAGTGATGCAAACCAAAGGTCCAGTTTTCGTAACAGCATTTAGTCCCCTCTGCATGGTTATTGTTGCAATCATGAGCTCTATCATTCTAGCTGAACAATTGTTTCTTGGAAGGGTGATAGGTGCCATTATTATTGTTTTGGGCCTGTATCTTGTGGTGTGGGGTAAAAGCAAAGATTACAACAACCCATCAAGTCCAATTTCTAAAGAGCCAATTTTGCCCGATAAACAAATTGCAATGGAGGGCAATGTGAAAATGGAACATTGTAATGATGAGGTTATCACTATTGGGAGCTCTGGTGTAAGAATCATAACTCAAGAATAA 1164 0.4029 MDELNHENTLIGSKTSVDVLFKAAMNKGMSNYVLVVYRHAVAFIESKAKDDNVNLHEDSSTQLARYTTATFAAAMTNIIPAITFCMAYILGLEKIKIRSIRSQAKVIGTLVAVSGAMVMTLMKGPLLGALGTHIGDNHNHNQQHNNGTNIQHTIKGTIMIITGCFSWSCFVILQTFRGSVLIVQVDYQLRRPKDKTIQFPSITLDTYPAELSLTSWICLLGSLEGAVVAMIMERGNPSVWFVKWDIKLVAIIYSTASLDVIAILRFTGIVGSGLAYYVQGVVMQTKGPVFVTAFSPLCMVIVAIMSSIILAEQLFLGRVIGAIIIVLGLYLVVWGKSKDYNNPSSPISKEPILPDKQIAMEGNVKMEHCNDEVITIGSSGVRIITQE 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0828 387 PANTHER WAT1-RELATED PROTEIN 201 355 IPR030184 GO:0016021|GO:0022857
Lal24g0828 387 PANTHER WAT1-RELATED PROTEIN 66 175 IPR030184 GO:0016021|GO:0022857
Lal24g0828 387 PANTHER WAT1-RELATED PROTEIN 16 44 IPR030184 GO:0016021|GO:0022857
Lal24g0828 387 Pfam EamA-like transporter family 241 333 IPR000620 GO:0016020|GO:0016021
Lal24g0828 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 262 338 - -
Lal24g0828 387 PANTHER WAT1-RELATED PROTEIN 66 175 - -
Lal24g0828 387 PANTHER WAT1-RELATED PROTEIN 16 44 - -
Lal24g0828 387 PANTHER WAT1-RELATED PROTEIN 201 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0828 Lal-Chr24 6582314 6586375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0828 17 380 Nodulin-like Gene Family AT2G37460 47.815 2.06e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0828 - - ahf:112727266 388.652