Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0819 ATGGGTGAAGTAGTGGTTTGTGTGCTAGCATTAGAAGATGTAAAAAATGAAAACAATGAGGAATCAAGAACAGAATTGAAGCGTGATTACCACCAATGCATTTCTGATACAATTGATGATAATACTGAGCCTGACCAGTCTCCAAAAAAGAAACAAATGAAAGATGATTCCAATGATGAAGTTCACCCGGGTGTTACGAACCCTAAAACTTCTGCAACGGAGAATGAGTTAACCACCTTTCGTGATATCAGTAACCAACCGAGTGAATCGGCGAAAATTGTTGAGTGTGGAGAACTGACTTCTACTTGTTTGGAGAATTCAAGTTCTTCTGACGAGACATTGAGTGATGAAGCCGGCTATCAGAATAATAAGAACAATATTAGTAATACATCACAGAATAATACAGACACATGCGACGCAACAATGTCATGTGTTGTGATGGAAATACCTAAGCATGTTAGTTTATCTGGTATTAGGAAAATTACTTTTAAGTTCAGTAAGAAGAAAGAGGACTATGATGAAGAATACTTGGCGAAGCCTGATTTAGATTATAATAGTGAGTTGCATGAAAACTCGTGTGGAATGGGATATGTTGGAACCGGAGATACGGACTTCTATACTGCTTGTAATATGGAACTGAAAATGTCGAAGAAGGTTGTTCCCAACTGCTATCCTACAAATGTTAAAAAGCTGTTATCAACTGGTATCCTTGATGGAGCTGTAGTGAAATATATGTATAACCCCGTGAAGGTTGAGCTACGTGGGATTATTGGCGGTGGTGGATACTTGTGTAGCTGTTCGCTTTGTAATTACTCCAGAGTGCTTAGTGCATATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGACATCCTAACAATCATATATACTTAGAGAATGGAAAGCTTATATACAGCATTATACAGGAAATAAAAGCTGCTCCACTCAGCATATTAGATGAGGTTATAAAGAATGTGGCTGGTTCATCTGTCAATGAGGAGTGCTTCCAGGCTTGGAAAGAAAGCCTTCTAGAAAGCAATGGGAGGGTTCAGGCTTATAAAAATTATAGCACAAAACTAACTGGGATGCCTCATAAACACATAAGTCAATCTGTAGAAAGTGTGAGCCACTTGTCTTCTTTGCATGCTCCGAGCCATTTTGAGCAGCAAATGTATCTGAAGCGGACAACTGATGAGTGGAAATATGCGGTGAAGAAAAGCTCCTGCCCGTATAACTCAGGTCTACAGCTGAAGAGAAGTGCTGATAGCTGCACTAAGAGAAGGGACAATGATTTACATAGGCTACTTTTTATGCCAAACGGACTGCCAGATGGCGCTGATTTGGCTTACTATGTCAAGGGACAGAAATTACTTGGAGGTTACAAACAGGGGAATGGTATAGTCTGTGGTTGTTGTGACGTAGAGATTAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGACGTCAACCTTACCGACACATATATACTTCCAGTGGACTAACACTTCATGATATAGCTCTCTCCCTGGCAAGTGGTCAAAATCTTACCATGGGAGATAGTGATGATATGTGTGCAATATGTGGAGATGGAGGGCACTTGATTCTTTGCAATGGATGTCCTAGGGCTTTTCATGCAGACTGCTTGGGTTTAGAGTGTGCTCCAGAAAGTCGGTGGCATTGTCTAAACTGTAGAGATAATGTTGGTAATGGTAGAGAATCTTCTATGGTGAGGCCAATCATGATACGGCTGAAACGAGATGATAAAGCTTCAGATTTTGAAATGGGGGGATGTGTTATTTGCAGGCAACATGATTTCAGTGTTGTTAAATTTGATGCGCGAACAGTAATAATTTGCGACCAGTGTGAGAAGGAGTACCATGTTGGTTGCTTGCAGGACATTGGGCTATTTGAGTTGGAAGAGCTGCATAAGAATAAATGGTTTTGTTGTGATGACTGCAATCGAATATACATGGCTCTTCAGAATTCAGTTTCTGCTGGAGCAGAAACTATAAAAACTTCGTTGTCAGAACTGATAATCAAGAAGCATGAGCAGAGGGGATTATGTACCTATGAAGGCATGAGTGACATCCAGTGGAGAATTTTGAATGGGAAGAGTCGTTATCCAGAGCATTTACCTTTACTTTCACGTGCTGCTGCGATTTTTCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGTCGTGACCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAATTTGGGGGGATGTATTGCATTGTTTTAATTGTTAATTCTGTTGTTGTATCTGCTGGGCTGCTTAGGATTTTTGGATGTAATGTTGCGGAGCTTCCACTAGTAGCTACAAGCAGAGAATATCAAGGAAAAGGTTATTTTCAAGTGCTATTCTCTTGCATAGAGAGGTTGTTGTGTTCTCTCAATGTAGAAAAGCTGGTACTTCCTGCAGCAGGGGATGCTGAGTCAATGTGGACAAAGAAATTAGGTTTTCGAAAGATGACTGAAGATCAGTTATCCAAATATCTTAGGGAGGTGCAGCTCACCCTCTTCAATAAAACTTCAATGCTTGAGAAGACAGTGCAACCAGGAAGAGAGTGA 2613 0.4083 MGEVVVCVLALEDVKNENNEESRTELKRDYHQCISDTIDDNTEPDQSPKKKQMKDDSNDEVHPGVTNPKTSATENELTTFRDISNQPSESAKIVECGELTSTCLENSSSSDETLSDEAGYQNNKNNISNTSQNNTDTCDATMSCVVMEIPKHVSLSGIRKITFKFSKKKEDYDEEYLAKPDLDYNSELHENSCGMGYVGTGDTDFYTACNMELKMSKKVVPNCYPTNVKKLLSTGILDGAVVKYMYNPVKVELRGIIGGGGYLCSCSLCNYSRVLSAYEFEQHAGAKTRHPNNHIYLENGKLIYSIIQEIKAAPLSILDEVIKNVAGSSVNEECFQAWKESLLESNGRVQAYKNYSTKLTGMPHKHISQSVESVSHLSSLHAPSHFEQQMYLKRTTDEWKYAVKKSSCPYNSGLQLKRSADSCTKRRDNDLHRLLFMPNGLPDGADLAYYVKGQKLLGGYKQGNGIVCGCCDVEISPSQFEAHAGMAARRQPYRHIYTSSGLTLHDIALSLASGQNLTMGDSDDMCAICGDGGHLILCNGCPRAFHADCLGLECAPESRWHCLNCRDNVGNGRESSMVRPIMIRLKRDDKASDFEMGGCVICRQHDFSVVKFDARTVIICDQCEKEYHVGCLQDIGLFELEELHKNKWFCCDDCNRIYMALQNSVSAGAETIKTSLSELIIKKHEQRGLCTYEGMSDIQWRILNGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGCNVAELPLVATSREYQGKGYFQVLFSCIERLLCSLNVEKLVLPAAGDAESMWTKKLGFRKMTEDQLSKYLREVQLTLFNKTSMLEKTVQPGRE 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0819 870 MobiDBLite consensus disorder prediction 17 78 - -
Lal24g0819 870 ProSitePatterns Zinc finger PHD-type signature. 526 565 IPR019786 -
Lal24g0819 870 ProSiteProfiles Zinc finger PHD-type profile. 523 568 IPR019787 -
Lal24g0819 870 SUPERFAMILY FYVE/PHD zinc finger 595 652 IPR011011 -
Lal24g0819 870 Pfam Tify domain binding domain 255 309 IPR032308 -
Lal24g0819 870 Pfam Tify domain binding domain 459 508 IPR032308 -
Lal24g0819 870 Gene3D - 696 864 - -
Lal24g0819 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 515 585 IPR013083 -
Lal24g0819 870 SUPERFAMILY FYVE/PHD zinc finger 521 569 IPR011011 -
Lal24g0819 870 MobiDBLite consensus disorder prediction 17 62 - -
Lal24g0819 870 ProSitePatterns Zinc finger PHD-type signature. 599 654 IPR019786 -
Lal24g0819 870 SMART PHD_3 598 655 IPR001965 -
Lal24g0819 870 SMART PHD_3 525 566 IPR001965 -
Lal24g0819 870 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 24 866 - -
Lal24g0819 870 MobiDBLite consensus disorder prediction 63 78 - -
Lal24g0819 870 PANTHER AUTOIMMUNE REGULATOR 24 866 - -
Lal24g0819 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 657 IPR013083 -
Lal24g0819 870 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 754 839 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0819 Lal-Chr24 6492144 6502994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0819 1 865 PHD Transcription Factor Family AT3G53680 51.810 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0819 - - gmx:100808999 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0819 24 6492144 6502994 Lal24g0819 24 6492144 6502994 ECH
Lal13g1089 13 8198369 8208841 Lal24g0819 24 6492144 6502994 LSH