Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0807 ATGGCAAGTTGTAACATGGCATCAATAGCATCTGGGTTTGTGTTGTTTAATGTTGTAACAAACTCATCAACTCTTAGGAACAACAATATGGTAATGTTCCCTACAAAGAATGTTAATGGTTCTTCTTCTAGGCTTGTTGTAAGGGCAGCAGATGAGGCTTCTGCGGCGGCGGCGGCGGCACCGGCAACCGTGAATCCTGTAGTAGAAGGAGAAGCAGCTAAGAAACCCAAGCCACCACCTATTGGTCCCAAGAGAGGTACCAAGGTGAAGATTCTTAGGAGGGAATCCTATTGGTACAAAGAATCTGGTTCAGTTGTTGCTGTTGATCAGGATCCGAAAACTCGCTACCCAGTTGTGGTTCGATTCAACAAAGTTAACTATGCCAATGTATCAACAAACAACTATGCTTTGGATGAGATTGAGGAAGTGAAATGA 435 0.4391 MASCNMASIASGFVLFNVVTNSSTLRNNNMVMFPTKNVNGSSSRLVVRAADEASAAAAAAPATVNPVVEGEAAKKPKPPPIGPKRGTKVKILRRESYWYKESGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0807 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED 1 144 IPR003375 GO:0009522|GO:0009538|GO:0015979
Lal24g0807 144 Gene3D - 77 144 - -
Lal24g0807 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A 1 144 - -
Lal24g0807 144 SUPERFAMILY Electron transport accessory proteins 83 143 IPR008990 -
Lal24g0807 144 Pfam Photosystem I reaction centre subunit IV / PsaE 84 143 IPR003375 GO:0009522|GO:0009538|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0807 Lal-Chr24 6394550 6396654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0807 K02693 - rcu:8262788 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0807 24 6394550 6396654 Lal24g0807 24 6394550 6396654 ECH
Lal12g0877 12 7210190 7213565 Lal24g0807 24 6394550 6396654 LSH
Lal13g1072 13 8018208 8020286 Lal24g0807 24 6394550 6396654 LSH
Lal13g0680 13 4402068 4406866 Lal24g0807 24 6394550 6396654 LSH