Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0806 ATGAAACTGATGGCTGCTGTTGCCAATCCCATAGTTGGGTCCCAGGTTTGGGTGGTGGATTCTGATGTAGCTTGGATAGATGGTGAAGTCTTGGAGGTTAAAGGGGATGAAATCAAAGTCCTTTGCACTTCAGGCAAGCTGGTTGTTGTTAAAGTTTCCAATGTTTATCTCAAAGATACCGAAGCCCCAGCATGTGGAGTGGACGATATGACGAAACTTGCTTATTTGCATGAACCTGGTGTCCTAGATAATCTGAGATCAAGATATGACATCAATGAAATTTATACATACACTGGGAGTATATTGATTGCTGTGAACCCTTTCATCAGGCTTCCTCATTTATATGATAGTAATATGATGGCACAATATAAAGGAGCAGGTTTTGGTGAGCTAAGTCCACATCCTTTTGCTGTTGCAGATGCAGCATATAGGCTTATGATTAATGAAGGTGTCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGGGCTGGTAAAACTGAAAGCACCAAGTTACTCATGCAGTATCTTGCTTACATGGGAGGTAGAGCTACTGTTGGTGAAGGTAGAACTGTTGAGCAGAAAGTCCTAGAGTCCAATCCTGTTCTAGAAGCCTTTGGTAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGAAGAATTTCAGGAGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGTCAGTTGTCAGATTTAGAGAGAAATTATCACTGTTTCTATATGCTCTGTGCTGCACCTCCGGAGGATGTTCAGAAGTTCAAATTAGGAAACCCACGAACATTTCATTATTTGAATCAATCAAATTGCTTTGAGTTGGAAGGGCTTGATGAGTCCAAAGAATACCATGATACAAGGAGAGCAATGGACGTTGTTGGAATAAGTTCTGAGGAACAGGAAGCGATATTTCGAGTGGTTGCTGCAATTTTGCACCTTGGGAACATTGAATTTACAAAAGGGATGGAAATGGACTCATCTATGCCCAAAGATGAAAAATCTCGATTCCACCTACAAACTGCAGCAGAACTTTTTATGTGTGATGCAAAAGCACTTGAAGATTCTCTTTGTGAACGTATAATTGTTACTCGTGATGAAACTATTACGAAATGTCTGGATCCGGAGGCTGCTGCTCTAAGCCGAGATGCTTTGGCTAAGACTGTGTACACAAGGTTGTTTGACTGGCTGGTGGATAAAATTAATAATTCAATTGGTCAAGACCCTGAGTCAAAGTCCTTAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAACAATTCTGTATTAATTTGACCAATGAAAAGCTTCAGCAGCACTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGTGGAATTATTGCTCTTCTCGATGAAGCATGTATGTTTCCTAGATCAACACATGAAACTTTTTCCCAGAAGCTGTATCAGACATTCAAAAACCATTCAAGGTTCAGCAAGCCCAAATTGGCACGTAGTGACTTCACAATATGCCATTATGCTGGTGATGTCACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACACCAACATCTTCTTTATGCTTCCAAATGTCCTTTCGTTTCGGGTTTGTTTCTCCCCTCACCTGAGGTATCTTCCAAACAATCAAAGTTCTCTTCAATAGGTACCCGATTTAAGCAACAATTGATATCACTGCTTGAAACACTCAGTGCCACTGAGCCCCACTATATTCGTTGTGTAAAACCGAATAATCTTCTCAAGCCAGGAATTTTTGAGAATAAAAATGTTTTGCAGCAACTGCGTTGTGGGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCTGGCTATCCCACTAGAAAAGCGTTTGTTGAATTTGTGGATCGATTTGGCCTTCTTGCACCTAAAGCTTTGGATGGAAGATCCGACGAGGTCACTGCTTGCAAGAGGATTCTGGAGGAGGTTGAACTTAAAGGCTATCAGATTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACACGAAGAAGTGAGCTCTTAGGAAAGTCTGCAAGTGTTATTCAGAGGAAAGTTCGTTCCTATTTGGCTTGCAGAAGTTTTGTCTTGCTTCGTTTGTCTGCTAGACAGATACAAGCGGCATGCAGAGGTCATCTTGCTCGGCATGCTTATGAGGGATTGCGTCAGGAGGCTTCTAGTCTGATTATTCAGCAGTATATCCGCATGTATATTGCTAGGAAGACATACACTGAATTGTTTAGCTCTGCTGTTTCTATTCAGACTGGTATGCGAGGGATGGCCGCTCGCTGTAACCTACACTTTAGGAAGCAGGCTAGGGCAGCTATTGTCATTCAGAGCCACTGCCGGAAGTACTTGGCACAGCATCATTTTAGAATCTTAAAGAAGGCGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCGAAAAATAAGCTAGAAAAGCAAGTTGAAGACCTTACATTGAGATTGCAACTGGAAAAACGCATGAGGGTTGACATGGAAGTATTAAAATCACAAGAAACCCAAAGATTACAGTCTGCTTTGCAAGAGATGCAGCTTCAGTTTAAAGAAACTAAGGAACTGCTTCAAAGGGAACGTGAGGCTGCAAAAAGAGAAGCAGAGAGAGTCCCTGTCATACAGGAGGTTCCTGTTGTTGACAATGCTTTGGTGGAGAACCTTACTAGTGAAAATGAGAAACTCAAGACCTTGGTGACTTTGCTGGAAAAAAGAATTGATGAAACAGAAAAAAAGTATGAAGAGGCAAGCAAAATTAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCTGAAACAAAAATAACCCAGTTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCTCAGATATTGAATCTGAAAACCAGGTTCTTCGGCAACAAACTCTGGTTAACTCATCCTTGAAAACGATGTCAAGGAATCGTTCTCTTTCAGAGAACTTGGAAAATGGTCATCATTCGACCGAAGAGCAGAAAGCTGTGGAGACTGTGACACCTGTGAAAAAGTTTGGAACAGAATCTGATAGCAAGAGGAGATCCTACATTGAACGTCAACATGAGAATGTTGATACCCTTGTCAACTGTGTTATAAAAAGCACTAGCTTCCATCATGGTAAACCTGTTGCTGCATTTACCATTTACAAATGTCTTCTCCATTGGAAATCATTTGAAGCTGAAAGAACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGAATCAAGAAGACAATGATCTTATGGCCTATTGGCTACTGAATACGTCTGCGCTATTGTTTTTGCTGCAACAAAGTCTTAAATCTGGTGGTGCAATTGATGCAACCCCAGCTAGAAAACCACCTAATCCAACATCCCTATTTGGAAGAATGACTATGGGTTTTCGTTCATCCCCTTCTTCTTCCAACCTCACTGGCCTATCATTAGATTTTGTACGCAAGGTAGAGGCTAAATACCCTGCTTTGCTCTTCAAGCAGCAGCTCACAGCCTATGTGGAGAAAATATATGGCATCCTTCGGGACAACTTGAAAAAGGAGTTAGCATCTTTGCTTTCATTATGTATCCAGGCACCACGAACCTCAAAGGGAGTGTTAAAATCTGGCCGATCCTTTGCTAAAGATTCTCCCATGGGTCACTGGCTGAGTATAATTGAGTCCCTCAACACCCTCCTCTGTACCCTGAAAGAGAACTTTGTGCCTCCAGTCCTTATCCAAAAAATCTTCACTCAAGCATTCTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGTCGCGATTGTTGCACATTCAGCAATGGGGAATATGTCAAAGCTGGTTTAGCAGAATTGGAGATGTGGTGCGTCCAAGCAAAGGAGGAGAACTGGTGTGCGTATCTTCATAAACAGTCTAACCTAGTTGGCTTGTGCTTGCAGTATGCGGGGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCCGTTGGATTCCTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCTGTCATGAGTGTCCAGCAGCTGTATAGAATATGTGCACTTTATTGGGATGATAATTACAATACCCGAAGTGTATCCCCAGATGTCCTTTCAAGCATGAGGGTACTTATGACTGAGGACTCTAATAATGCTCAGAGTGATTCTTTTTTGTTGGATGACAATTCAAGCATCCCTTTCTCAGTGGATGATCTCTCTACATCATTGCAAGAGAAAGATTTCTCAGAGATGAAACCAAGTGATGAGCTTCTTGAGAATCCTGCCTTTCAGTTTTTAAATGAGTAG 4524 0.4105 MKLMAAVANPIVGSQVWVVDSDVAWIDGEVLEVKGDEIKVLCTSGKLVVVKVSNVYLKDTEAPACGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGSILIAVNPFIRLPHLYDSNMMAQYKGAGFGELSPHPFAVADAAYRLMINEGVSQSILVSGESGAGKTESTKLLMQYLAYMGGRATVGEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQLSDLERNYHCFYMLCAAPPEDVQKFKLGNPRTFHYLNQSNCFELEGLDESKEYHDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGMEMDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCERIIVTRDETITKCLDPEAAALSRDALAKTVYTRLFDWLVDKINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFSQKLYQTFKNHSRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQHLLYASKCPFVSGLFLPSPEVSSKQSKFSSIGTRFKQQLISLLETLSATEPHYIRCVKPNNLLKPGIFENKNVLQQLRCGGVMEAIRISCAGYPTRKAFVEFVDRFGLLAPKALDGRSDEVTACKRILEEVELKGYQIGKTKVFLRAGQMAELDTRRSELLGKSASVIQRKVRSYLACRSFVLLRLSARQIQAACRGHLARHAYEGLRQEASSLIIQQYIRMYIARKTYTELFSSAVSIQTGMRGMAARCNLHFRKQARAAIVIQSHCRKYLAQHHFRILKKAAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVDMEVLKSQETQRLQSALQEMQLQFKETKELLQREREAAKREAERVPVIQEVPVVDNALVENLTSENEKLKTLVTLLEKRIDETEKKYEEASKISEERLKQALDAETKITQLKTAMQRLEEKFSDIESENQVLRQQTLVNSSLKTMSRNRSLSENLENGHHSTEEQKAVETVTPVKKFGTESDSKRRSYIERQHENVDTLVNCVIKSTSFHHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQEDNDLMAYWLLNTSALLFLLQQSLKSGGAIDATPARKPPNPTSLFGRMTMGFRSSPSSSNLTGLSLDFVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQAPRTSKGVLKSGRSFAKDSPMGHWLSIIESLNTLLCTLKENFVPPVLIQKIFTQAFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELEMWCVQAKEENWCAYLHKQSNLVGLCLQYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPVMSVQQLYRICALYWDDNYNTRSVSPDVLSSMRVLMTEDSNNAQSDSFLLDDNSSIPFSVDDLSTSLQEKDFSEMKPSDELLENPAFQFLNE 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0806 1507 Gene3D - 443 627 - -
Lal24g0806 1507 PANTHER MYOSIN-14 8 1505 - -
Lal24g0806 1507 Coils Coil 996 1030 - -
Lal24g0806 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 862 IPR027417 -
Lal24g0806 1507 CDD MyosinXI_CBD 1085 1476 IPR037975 GO:0007015
Lal24g0806 1507 Pfam IQ calmodulin-binding motif 837 856 IPR000048 GO:0005515
Lal24g0806 1507 Pfam IQ calmodulin-binding motif 766 782 IPR000048 GO:0005515
Lal24g0806 1507 Pfam IQ calmodulin-binding motif 790 807 IPR000048 GO:0005515
Lal24g0806 1507 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 11 60 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 Gene3D - 739 788 - -
Lal24g0806 1507 Gene3D - 789 839 - -
Lal24g0806 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 789 IPR027417 -
Lal24g0806 1507 ProSiteProfiles Myosin motor domain profile. 65 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 PANTHER MYOSIN 8 1505 - -
Lal24g0806 1507 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Lal24g0806 1507 Coils Coil 859 893 - -
Lal24g0806 1507 SMART iq_5 786 808 IPR000048 GO:0005515
Lal24g0806 1507 SMART iq_5 834 856 IPR000048 GO:0005515
Lal24g0806 1507 SMART iq_5 738 760 IPR000048 GO:0005515
Lal24g0806 1507 SMART iq_5 761 783 IPR000048 GO:0005515
Lal24g0806 1507 SMART iq_5 809 831 IPR000048 GO:0005515
Lal24g0806 1507 Gene3D - 256 314 - -
Lal24g0806 1507 ProSiteProfiles IQ motif profile. 812 839 IPR000048 GO:0005515
Lal24g0806 1507 SMART DIL_2 1310 1435 IPR002710 -
Lal24g0806 1507 PRINTS Myosin heavy chain signature 95 114 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 PRINTS Myosin heavy chain signature 152 177 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 PRINTS Myosin heavy chain signature 200 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 PRINTS Myosin heavy chain signature 433 461 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 PRINTS Myosin heavy chain signature 486 514 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 ProSiteProfiles Dilute domain profile. 1134 1453 IPR002710 -
Lal24g0806 1507 ProSiteProfiles IQ motif profile. 762 791 IPR000048 GO:0005515
Lal24g0806 1507 Pfam Myosin N-terminal SH3-like domain 13 55 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 Coils Coil 905 936 - -
Lal24g0806 1507 ProSiteProfiles IQ motif profile. 787 816 IPR000048 GO:0005515
Lal24g0806 1507 Gene3D Kinesin motor domain 68 666 IPR036961 -
Lal24g0806 1507 Coils Coil 954 988 - -
Lal24g0806 1507 Pfam Myosin head (motor domain) 67 724 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0806 1507 CDD MYSc_Myo11 79 724 IPR036018 -
Lal24g0806 1507 Gene3D - 670 737 - -
Lal24g0806 1507 Gene3D Myosin VI head, motor domain, U50 subdomain 316 605 - -
Lal24g0806 1507 Pfam DIL domain 1311 1432 IPR002710 -
Lal24g0806 1507 SMART MYSc_2a 59 737 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0806 Lal-Chr24 6369744 6393004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0806 4 1506 Myosins gene family AT5G43900 72.324 0.0 2256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0806 K10357 - gmx:100791070 2574.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0806 24 6369744 6393004 Lal24g0806 24 6369744 6393004 ECH
Lal13g1069 13 7966019 7985016 Lal24g0806 24 6369744 6393004 LSH
Lal13g0713 13 4648117 4663871 Lal24g0806 24 6369744 6393004 LSH
Lal11g1104 11 14724703 14739239 Lal24g0806 24 6369744 6393004 PCT
Lal1g1868 1 20954802 20967651 Lal24g0806 24 6369744 6393004 PCT
Lal18g0232 18 1922471 1933349 Lal24g0806 24 6369744 6393004 PCT
Lal24g0806 24 6369744 6393004 Lal11g1104 11 14724703 14739239 PCT
Lal24g0806 24 6369744 6393004 Lal1g1868 1 20954802 20967651 PCT