Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0805 ATGGCAGCATCACTAACATGTTCCATCACAGACCTCAACTCTCTTCTCAGTGTCAATGGTTCTAATCACAATGCTGCAGCTGAATACATTTGTCAAAGATTTGATGCAATTTCAAACAAATTCACTGACACAACCTATGCATTGGACAACACATACCTTCTCTTTTCAGCGTACCTTGTTTTCTCCATGCAACTTGGTTTTGCAATGTTATGTGCAGGTTCTGTACGTGCAAAGAACACCATGAACATCATGCTAACCAATGTTCTTGATGCTGCAACAGGTGGCATATCCTATTACCTTTTTGGTTTTGCATTTGCTTTTGGAACTCCATCAAATGTTTTCATTGGAAAACACTTGTTTGGGCTAGAGAACTTTCCTTCAATTTCTTTTGATTATGGTTACTTTCTTTACCAATGGGCTTTCGCAATTGCGGCTGCTGGGATCACGAGCGGTTCGATCGCTGAAAGAACACAATTTGTGTCTTATTTGATTTACTCTTCATTCCTAACCGGTTTGGTTTATCCAATTGTGTCTCATTGGTTCTGGTCTTCTGATGGGTGGGGTAGTCCTGCACGGTCTGAAAATCTGTTATTTGGAACTGGGGTCATTGATTTTGCTGGCTCAGGCGTGGTTCATTTGGTTGGTGCTGTTGCTGGTTTCTGGGGTGCTTTCATCGAAGGCCCACGTATGGGTAGGTTTGATCATGAAGGAAAACCAGTTCCATTACGAGGACATAGTGGAACTTTGGTTGTTTTAGGAACATTCTTGTTATGGTTTGGTTGGTATGGGTTTAACCCTGGTTCATTTCTTAACATATCAAAGGTTTATGGAAAAAGTGGAGATTACTATGGACAATGGAGTGCTGTAGGAAGAACTGCAGTGACAACAACACTAGCTGGATGTTCAGCAGCACTAACAACATTGTTTGGAAAAAGAATACAAACTGGTCATTGGAATGTAACTGATGTTTGCAATGGTTTACTTGGTGGGTTTGCTGCTATAACTGCAGGTTGTTCTGTGGTGGAACCATGGGCTGCAATTATTTGTGGGTTTGTGGCTGCATGGGTTCTAATTGGTGCTAACATGCTAGCTGAGAGGTTCAAGTATGATGATCCATTAGAGGCTGCACAACTTCATGGTGGTTGTGGAACTTGGGGAATAATTTTCACTGCATTGTTTGCTACTAAGAAGTATGTGAATGAAGTCTATCCAGGGTTCCCTGATAGGCCTTATGGTTTGTTTATGGGAGGGGGTGGAAAGCTTTTGGCTGCACATCTTATTCAGATTTTGGTGATCATAGTTTGGGTCAGTGTTACAATGGGAACTGTGTTCTTTTTGCTGCATAAGTTGAACTTGTTGAGAATCTCAAATGAAGAGGAGATGAAAGGACTTGATAAAACAAGCCATGGTGGATTGGCTTATGTTTATAATGAAGAGATTGAGCTTACAAAGAATGCATTTGCAGCAACAACAAGGACACATTCTTCTGAAGTAGCTTGA 1500 0.4113 MAASLTCSITDLNSLLSVNGSNHNAAAEYICQRFDAISNKFTDTTYALDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGISYYLFGFAFAFGTPSNVFIGKHLFGLENFPSISFDYGYFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVSHWFWSSDGWGSPARSENLLFGTGVIDFAGSGVVHLVGAVAGFWGAFIEGPRMGRFDHEGKPVPLRGHSGTLVVLGTFLLWFGWYGFNPGSFLNISKVYGKSGDYYGQWSAVGRTAVTTTLAGCSAALTTLFGKRIQTGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAAWVLIGANMLAERFKYDDPLEAAQLHGGCGTWGIIFTALFATKKYVNEVYPGFPDRPYGLFMGGGGKLLAAHLIQILVIIVWVSVTMGTVFFLLHKLNLLRISNEEEMKGLDKTSHGGLAYVYNEEIELTKNAFAATTRTHSSEVA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0805 499 PANTHER AMMONIUM TRANSPORTER 1 485 - -
Lal24g0805 499 Gene3D Ammonium transporter AmtB like domains 27 493 IPR029020 -
Lal24g0805 499 SUPERFAMILY Ammonium transporter 46 455 - -
Lal24g0805 499 PANTHER AMMONIUM TRANSPORTER 1 485 - -
Lal24g0805 499 Pfam Ammonium Transporter Family 52 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lal24g0805 499 ProSitePatterns Ammonium transporters signature. 204 229 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lal24g0805 499 TIGRFAM amt: ammonium transporter 49 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0805 Lal-Chr24 6344225 6345724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0805 1 479 Inorganic Solute Cotransporters AT4G28700 77.019 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0805 K03320 - jre:109020544 830.091