Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0804 ATGGCGCTATGGATGGAAAAGGGTTCTGAACCATTCACCGAAACAGAGAAAGCAGACCTTGACGCCATTGCTGCACTCAAAGAATCTGCAGCCATTGAACTCAAGGAAAAGGGTAATGAATATGTGAAGATGGGTAAGAAGCATTATTCTGATGCCATTGATTGCTACACTAGGGCAATTAATCAGAATGCTTTAAGTGATTCTGAGAACTCTATCCTTTTTTCAAATAGAGCCCATGTTAATTTGCTTCTAGGGAATCATAGGCGTGCTCTCACGGATTCTCAGGAAGCACTTAATTTGTGCCCATCAAATATAAAGGCAATATATAGAGCTGTGAAAGCTTCTCTTTCACTAGATTTGTTGGATGAAGCACAAGATTATTGCCAAAAGGGTCTTCAGTTGGACCCCAATAATGAGGAATTGAAGAAGTTTGACCAGAAGATTGGTCTGAAGATAGCAGAGAATAAAAAACGTGAAGCTGAAGTCTCCAAAGCTGTCGTGGAGGCAAAGGAGCTCGTGTCTGCAATAGAGAATAGAGGCTTGAAGATTGGAAAGGAGATGTATCGAGAACTTACTGGATTAAGGAAGCCAGTGTTGGACAAAACTAATATTCTTCATTGGCCTGTTCTTCTGCTCTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGTGAGACTGACATGTTTTCACTTCACCTTGACATGATATCCTTTTCGGTGAAACGATTTAGATCTTCATATCTATCGAACATATTTGCAGAAGATCAGCCACTACCATGGGATGTGGAAAGGAAGTATAAACGCGAATTTGTTGAGTTATACTATGAGGTTGGTTCTGGACTTCTATCAAAGGAGAAACTTCATCAGTGTCTATTAGAGGGAACTGCAGCTTCTCATGTGCAAGAAAGTGGCGACGACGAGAAAAATCCAGTTGAGGATTTTAAACACAACACGGGCTTCCCTAAATGGATCAAAGTAAATGAAAGGAAAACACTACATGATGTTCTTAAAGAGCCTAATTTCATCATTCCTTGGATCCCAGTCTTCTATGTTGTTTCAAAGAAATCTAGCTTTTATGGGAAGTTTAAAGCTGGAAAATGGGCCCCACCAAATGGAAATATTGTAATGAGATAA 1140 0.3991 MALWMEKGSEPFTETEKADLDAIAALKESAAIELKEKGNEYVKMGKKHYSDAIDCYTRAINQNALSDSENSILFSNRAHVNLLLGNHRRALTDSQEALNLCPSNIKAIYRAVKASLSLDLLDEAQDYCQKGLQLDPNNEELKKFDQKIGLKIAENKKREAEVSKAVVEAKELVSAIENRGLKIGKEMYRELTGLRKPVLDKTNILHWPVLLLYAEVMSSDFIEDFCETDMFSLHLDMISFSVKRFRSSYLSNIFAEDQPLPWDVERKYKREFVELYYEVGSGLLSKEKLHQCLLEGTAASHVQESGDDEKNPVEDFKHNTGFPKWIKVNERKTLHDVLKEPNFIIPWIPVFYVVSKKSSFYGKFKAGKWAPPNGNIVMR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0804 379 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 370 - -
Lal24g0804 379 SMART tpr_5 31 66 IPR019734 GO:0005515
Lal24g0804 379 SMART tpr_5 105 138 IPR019734 GO:0005515
Lal24g0804 379 SMART tpr_5 71 104 IPR019734 GO:0005515
Lal24g0804 379 Coils Coil 150 170 - -
Lal24g0804 379 Pfam Cns1/TTC4 Wheel domain 200 286 IPR044059 GO:0051879
Lal24g0804 379 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 370 - -
Lal24g0804 379 Gene3D Tetratricopeptide repeat domain 27 173 IPR011990 GO:0005515
Lal24g0804 379 SUPERFAMILY TPR-like 22 144 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0804 30 160 Calmodulin-binding Proteins AT3G25230 32.394 4.89e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0804 K24927 - gmx:100783179 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0804 24 6329677 6334380 Lal24g0804 24 6329677 6334380 ECH