Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0780 ATGTTCCTCTTTTGCAGAGAAGTGAAGAATTTGGGGAAAGTTGGTGGCATGGGGAAAGAACAAATTGAGGTGCTGAATGCACTGGATGTGGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACGAAGCTACTAGGCCGCATATATTACCACCATGATGGTGCAGAAAAACCTGGCTCATTGCCTCCTAATGTGGCAGCAGCTGTTAATGGTGTAGCTTTGGTTGGAACGCTTTCTGGGCAACTCTTCTTCGGCTGGCTAGGTGATAAATTGGGCCGAAAAAAGGTCTATGGCATGACACTGATGCTGATGGTTTTGTGCTCCATTGCTTCTGGACTATCTTTCGGACGTGATCCAAAAACTGTGATGACAACTCTTTGCTTTTTCCGATTCTGGCTTGGTTTTGGCATTGGTGGAGACTACCCGCTTTCTGCTACAATCATGTCCGAGTATGCAAATAAGAAGACTCGCGGCGCGTTTATAGCTGCAGTCTTTGCTATGCAAGGTTTTGGAATTTTGGCAGGTGGTATATTTGCAATCGTAATCTCATCTACATTCAAGTCCAAATTTAGTGCTCCAGCGTACGAGGTTGATCCATTGGGTTCAACCGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTGATGTTTGGAGCAATTCCAGCTGCAATGACTTTCTACTCGCGGTCGAAAATGCCAGAAACTGCGCGTTATACTGCCCTGGTTGCTAAGAATACAGAGCAGGCTGCAAAAGATATGGCTAAGGTTATGCAGATGGAGATTGGAGCAGAACCAAAGAGAGAAGAGCAGGAACAGACTAAGCAATTTGGCTTGTTCTCCAAGGAATTCCTCGCTCGCCATGGACTACATTTACTTGGAACTTGCAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAAAAGGATATTTTCACCGCTATCGGTTGGATTCCTCCTGCAAAAACAATGAATGCACTCGAGGAGGTCTACAGAATTGCGAGGGCTCAAACGCTTATCGCTCTTTGTAGTACAGTTCCAGGATACTGGTTTACGGTGGCTTTCATTGACAGAATAGGAAGATTTGCTATCCAATTGATGGGATTCTTCTTTATGACTGTCTTTATGTTTGCTCTTGCCATTCCTTATGACCATTGGACTCATAAGGAAAACAGAATCGGATTCGTCGTGATGTATTCCTTGACATTTTTCTTTGCTAACTTTGGGCCTAATGCTACCACTTTTGTTGTGCCAGCTGAAATTTTCCCGGCCAGATTTCGATCTACTTGCCACGGGATATCATCAGCATCAGGGAAGCTTGGAGCAATGATTGGTGCATTTGGATTCTTGTATTTGGCACAGAACCAAGACAAGACCAAAGCTGAAGCTGGGTACCCTGCTGGTATTGGTGTGAAGAATTCACTGCTTTTGTTGGGTGTGGTTAACATTTTAGGATTCTTGTTCACATTCTTGGTTCCTGAGTCAAATGGTAAATCTTTGGAGGAGATGTCTGGTGAGAATGAAGAGGGAGAAACCAAGGCATAA 1617 0.4391 MFLFCREVKNLGKVGGMGKEQIEVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHHDGAEKPGSLPPNVAAAVNGVALVGTLSGQLFFGWLGDKLGRKKVYGMTLMLMVLCSIASGLSFGRDPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAIVISSTFKSKFSAPAYEVDPLGSTVPQADYVWRIILMFGAIPAAMTFYSRSKMPETARYTALVAKNTEQAAKDMAKVMQMEIGAEPKREEQEQTKQFGLFSKEFLARHGLHLLGTCSTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMIGAFGFLYLAQNQDKTKAEAGYPAGIGVKNSLLLLGVVNILGFLFTFLVPESNGKSLEEMSGENEEGETKA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0780 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 17 534 - -
Lal24g0780 538 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 17 534 - -
Lal24g0780 538 SUPERFAMILY MFS general substrate transporter 27 528 IPR036259 -
Lal24g0780 538 CDD MFS_PhT 41 519 - -
Lal24g0780 538 TIGRFAM 2A0109: phosphate:H+ symporter 27 530 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lal24g0780 538 Pfam Sugar (and other) transporter 42 528 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal24g0780 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 521 IPR020846 GO:0022857
Lal24g0780 538 Gene3D MFS general substrate transporter like domains 36 538 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0780 Lal-Chr24 6064310 6065926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0780 17 535 Inorganic Solute Cotransporters AT3G54700 84.586 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0780 K08176 - gmx:100786638 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0780 24 6064310 6065926 Lal24g0780 24 6064310 6065926 ECH
Lal13g1020 13 7527987 7529546 Lal24g0780 24 6064310 6065926 LSH
Lal24g0780 24 6064310 6065926 Lal1g1887 1 21143078 21144700 PCT
Lal24g0780 24 6064310 6065926 Lal20g0024 20 186343 187947 PCT