Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0779 ATGGAAGTTGGTAAGGCCCATACCGACTTCTCAATGGAAGTTGGTAAGGCCCATACCGACTTCTCAATGGAAGTTGGTAAGGCCCATACCGACTTCTCAATGGAAGTTGGTAAAACCCATACCGACTTCTCAACAGGAACAACTCTAAACATGACAGTCTCTTCCAATTCAGCTCATGCACAAGTACTCAAAGAAACACAACCTCCATCATCATATTCATCAACACCAACAAATGAAAGCCATAGGGTAAGAGACTCAACAAGAAATGGGGTTAGAGTGTGGATTGGAACATTTGACACAGCTGAAGCAGCTCCTCTAGCTTATGACCAAGTTGCTTTATCAACAAGAGGTGCCATGGCAGTCCTCAATTTTCCTGAACAAGTTGTTAAGGAATCACTCAAAGACATGACCTATAACAACAATGATAACAATAACCCTTCTTTGGAATATGATTCCTCTACTGACCAAAAAGGGTGGCATAGAGTTAGAGCTGCTTTCCAAAATGTGCTGGTGTTGGAGGATTTGGGATATGATTATCTAGAGCAAGTTCTGAGCTTCACTTCTTCTCAAGCCTAA 576 0.4201 MEVGKAHTDFSMEVGKAHTDFSMEVGKAHTDFSMEVGKTHTDFSTGTTLNMTVSSNSAHAQVLKETQPPSSYSSTPTNESHRVRDSTRNGVRVWIGTFDTAEAAPLAYDQVALSTRGAMAVLNFPEQVVKESLKDMTYNNNDNNNPSLEYDSSTDQKGWHRVRAAFQNVLVLEDLGYDYLEQVLSFTSSQA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0779 191 SUPERFAMILY DNA-binding domain 82 126 IPR016177 GO:0003677
Lal24g0779 191 PANTHER DNA-BINDING DOMAIN 83 186 IPR044808 GO:0003700|GO:0009873
Lal24g0779 191 CDD AP2 89 127 IPR001471 GO:0003700|GO:0006355
Lal24g0779 191 Gene3D AP2/ERF domain 78 127 IPR036955 GO:0003700|GO:0006355
Lal24g0779 191 MobiDBLite consensus disorder prediction 55 80 - -
Lal24g0779 191 ProSiteProfiles AP2/ERF domain profile. 58 125 IPR001471 GO:0003700|GO:0006355
Lal24g0779 191 SMART rav1_2 79 131 IPR001471 GO:0003700|GO:0006355
Lal24g0779 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B-LIKE 83 186 - -
Lal24g0779 191 MobiDBLite consensus disorder prediction 55 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0779 Lal-Chr24 6061673 6062824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0779 68 184 AP2-EREBP Transcription Factor Family AT3G23240 38.298 2.58e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0779 K14516 - gmx:100784784 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1019 13 7500559 7501629 Lal24g0779 24 6061673 6062824 LSH