Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0775 ATGGATATGGGTACTAACTTGCACCAAATGCTGAGAAGCCTCTGTTTGAATACTGAGTGGAAGTATGCAATCTTTTGGAAGCTCAAACATCGTGCTAGGATGATGTTGACATGGGAGGATGCTTACTATGAGAACCCTGTTGATTACGACTCTCCAGAAAATAATTGTTGCCAGAAGACCATAGAACCGATTGGTGGTGGGAATTTTTCGCGTGACCCTCTAGGGTTAGCTTTGGCAAAGATGTCTTATCAAGTATATTCTTTAGGAGAAGGTGTTGTTGGACAGGTAGCTGTTACCGGAAATTATAGGTGGATCTGTTCGGACAATCAAGTTACAGGTTCTGGTCCATCTTCGGAGTTTGCGGATGGGTGGCAATCTCAGTTTTCAGCTGGAATTAGGACTATTGTTGTTGTAGCAGTGGTTCCACTTGGGGTTGTTCAGCTTGGCTCTTTAGATGAAGTTATTGAAGATACGAGCGTTGTAGGTCATATCAGAAGTCTCTTTTTGTCTACACAAGATTATACCATAGGCTATGTTCCGAGTCATGTACAAAGTGTTGCAAAGAATTCTTCATCTCTGCTGAATGTATCCACCCAAACTTTGTCTTCAGAAGTTATGCATGCTTACTCTCATGATACGGGGAAATCCATGAAGAGTGAAAGACCGGATATTTTAATGCCCTTTCAATGTCCTGGGAAGAACTATTCACCTCCTGCTGGTTATCAGAAAATGGTTGTGGATGTGCCCAAGCACGAGGGGCTTGAATTTAAAAGCGATGGAAGTTCCATTTTGCTTCAGTCGTTATCAAATATGATGAATACGGAGCATCAAAAACTTGTAGAGATGAAACCTGTAAATGAGAGGAAGTCAGAAGGGAACAATAGTGGCTTCAAAGATACAAGTTTCGAAGCAGAAACACATTTCTCATCATTTTTCCACAATTTGGTTATGGATAACAATAGCTTCAATGATTTAATATGTCCATCAGAAAAAGTCGGAGTTGATTCTGCATCCTTTCTTCCTTCAGAGTTTCTTGATGCATTTCTTTGTGAAAGTGACCAGTTTTGTTACATAGATATCAACCAAAACGGGGTGTTGAATGTGCCCAGACCTTCAGATGCAAACTCCCAAGTTATTGAAAAGTTTCAGACTGAGCCTTGCCACAAGGATACTTCATACGCATTAAATTTCCCTGCTGGCTGCGAGTTACATGAAGCACTTGGACCAGGTTTTCTGAAAGGGAATAAATATTTTGATTGGGCTGCACAGGTAAATCAAGATGTTAAAACTGTTGAAATGCCGGATGAGATTAACTGTAGCCAACTGACTTCTGAATCTCGTCGAGAGCATCTTTTGGAAGCAATGGTGGCCAATGTTTGCCATAGTAATAATGATATTAATAGTGAGTTATCATTTTCTACATCAACTCAATCTGCAATAGCCTCAGAAAAAAATCCTGAAGCTTCTATTCATACCGTGAACACTATTAATTCAGAGGGCTATTCGATAGATCAGTTCTCTCTTGTCAGAGAGGGAAAACACCATAGTTTGAGTTCATCTGGGATATGTGATACGGTATCCCCGAAAGGTTTTTCTTCTGCATGTCCTAGTTCATGTCGTGAACAGTTTGAGAGGTCTTCTGAGCCAGCTAAGAGCAGCAAGAAGAGAGCTAGGCCTGGGGAAAGTAGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATAAAAGAGTTGCGAGAACTCGTGCCAAATGGAGCGAAGTGCAGCATTGATACCTTGCTGGAGTGCACGATAAAGCACATGCTCTTTCTCCAAAGTGTAACTACGTATGCTGACAAGCTAAATAAATTTGCCAACTCAAAGCCAAAGTTGCATCACATGGAAACAGATATTCATGGATCCTCTAGTTATCAACAAGGTTCAAGTTGGGCAATGGAAGTGGGTGGCCATCTGAAAATACGTTCAATATTAGTCGAGAATCTTAGTAAGAATGGCCAGATGCTTGTTGAGATGCTGTGTGAGGAATGCAGCCATTTTCTTGAGATAGTTGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGAAGGGTGCAACAGAAGCTCATGGTGAGAAAACATGCATAAGTTTTGTTGTTGAGGGCCAAAACAATAGAAATTTACACAGGTTGGATATCTTATGGCCACTTGTTCAATTACTACAATCCAAGAGCACAATGCACTCATAA 2229 0.4109 MDMGTNLHQMLRSLCLNTEWKYAIFWKLKHRARMMLTWEDAYYENPVDYDSPENNCCQKTIEPIGGGNFSRDPLGLALAKMSYQVYSLGEGVVGQVAVTGNYRWICSDNQVTGSGPSSEFADGWQSQFSAGIRTIVVVAVVPLGVVQLGSLDEVIEDTSVVGHIRSLFLSTQDYTIGYVPSHVQSVAKNSSSLLNVSTQTLSSEVMHAYSHDTGKSMKSERPDILMPFQCPGKNYSPPAGYQKMVVDVPKHEGLEFKSDGSSILLQSLSNMMNTEHQKLVEMKPVNERKSEGNNSGFKDTSFEAETHFSSFFHNLVMDNNSFNDLICPSEKVGVDSASFLPSEFLDAFLCESDQFCYIDINQNGVLNVPRPSDANSQVIEKFQTEPCHKDTSYALNFPAGCELHEALGPGFLKGNKYFDWAAQVNQDVKTVEMPDEINCSQLTSESRREHLLEAMVANVCHSNNDINSELSFSTSTQSAIASEKNPEASIHTVNTINSEGYSIDQFSLVREGKHHSLSSSGICDTVSPKGFSSACPSSCREQFERSSEPAKSSKKRARPGESSRPRPRDRQLIQDRIKELRELVPNGAKCSIDTLLECTIKHMLFLQSVTTYADKLNKFANSKPKLHHMETDIHGSSSYQQGSSWAMEVGGHLKIRSILVENLSKNGQMLVEMLCEECSHFLEIVEAIRSLGLTILKGATEAHGEKTCISFVVEGQNNRNLHRLDILWPLVQLLQSKSTMHS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0775 742 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 3 741 IPR043561 GO:0003700|GO:0006355
Lal24g0775 742 MobiDBLite consensus disorder prediction 544 571 - -
Lal24g0775 742 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 3 741 - -
Lal24g0775 742 MobiDBLite consensus disorder prediction 542 571 - -
Lal24g0775 742 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 557 606 IPR011598 GO:0046983
Lal24g0775 742 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 168 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0775 Lal-Chr24 6016215 6024186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0775 3 738 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.511 3.58e-146 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0775 - - gmx:100777740 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0775 24 6016215 6024186 Lal24g0775 24 6016215 6024186 ECH
Lal13g0114 13 718885 720995 Lal24g0775 24 6016215 6024186 LSH
Lal12g0678 12 4976612 4981404 Lal24g0775 24 6016215 6024186 LSH
Lal13g1011 13 7422758 7434722 Lal24g0775 24 6016215 6024186 LSH