Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0773 ATGTGTTTTATGGGCCAGACAACATATGACATAGATCCTGATGTTGTTCAACGGGGTCTTCATCTTCTCGATGTTTGCACTTTTTCCAATAGTGGCTCACCTAGTATCATAACTCAATATGATCCGGATTTAAATCAAATACAATATGTTAGAGAAGGCTTCTCTGAGCCTACGTATGTGGAGAATGATGAGGCTGTTGCACGCGCTTATCAAGAAGAATTGTCGCAACTTGAGTCTATGGAGGCTTCTGGAAGATCTAATTATGATAATGAGAACCTGCGAGAATCTGTTCTTGCACAAGATTGGATTTCTTCGGATGGAAACTATAACTATGGCAACCAGTCTTTTCAGAACACCATAGATGAGCCAAGCAATATGAAAGAAATGGAAAACTATGCTCCAAGTGAAAGAGACAACAATGATCATGAAATTGAAGTTTTTGGGTCGTCATCTGAGTCAAGAGAGATACCTGTTACCAGTGATGACTTAAGGCGTTCGTTGGAAATATCAGATGAGTCTTCTCTTGATGGTGAAGTAGGCAAAAGACTGAATCAGATGATCCCGACTCGTCATACCCCTAAAATCAACGAAAAAATACCATCGGATGACGAAGAAATATCTGATCATGAAAGGCTGCTAGACAGACTGCAGTTATATGATGTGATTGAGCGTAAGGTTGATGGAGATGGTAACTGCCAGTTTCGTTCTTTGTCAGATCAACTCTATCGCTCTCCGGAGCACCACAAGTTTGTGCGGGAACAAATTATTGAACAGCTCGAGTCTTTCCCAGAACTATATTCTGGTTATGTTCCTATGGCTTATTTTGATTATTTGAAGAAGATGCGAAAGAGCGGCGAATGGGGCGATCATGTTACATTGCAGGCTGCTGCAGATTGTTATGGTGTCAAAATTTTTGTTATCACATCTTTTAAGGACACATGTTACATTGAGATTCTTCCACAGATGCAGAAGTCTGGTAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACCCTATCTATCCTGAAGGAGGTGATATATTTGTGCATTATATGCCAACAATGTAA 1074 0.4032 MCFMGQTTYDIDPDVVQRGLHLLDVCTFSNSGSPSIITQYDPDLNQIQYVREGFSEPTYVENDEAVARAYQEELSQLESMEASGRSNYDNENLRESVLAQDWISSDGNYNYGNQSFQNTIDEPSNMKEMENYAPSERDNNDHEIEVFGSSSESREIPVTSDDLRRSLEISDESSLDGEVGKRLNQMIPTRHTPKINEKIPSDDEEISDHERLLDRLQLYDVIERKVDGDGNCQFRSLSDQLYRSPEHHKFVREQIIEQLESFPELYSGYVPMAYFDYLKKMRKSGEWGDHVTLQAAADCYGVKIFVITSFKDTCYIEILPQMQKSGRVIFLSFWAEVHYNPIYPEGGDIFVHYMPTM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0773 357 SUPERFAMILY Cysteine proteinases 204 344 IPR038765 -
Lal24g0773 357 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 29 346 - -
Lal24g0773 357 Gene3D - 202 349 - -
Lal24g0773 357 Coils Coil 60 80 - -
Lal24g0773 357 PANTHER OTU DOMAIN CONTAINING PROTEIN 29 346 - -
Lal24g0773 357 ProSiteProfiles OTU domain profile. 221 345 IPR003323 -
Lal24g0773 357 Pfam OTU-like cysteine protease 228 313 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0773 Lal-Chr24 6002288 6007244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0773 - - gmx:100820379 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1008 13 7393013 7398250 Lal24g0773 24 6002288 6007244 LSH
Lal13g1485 13 14352356 14357508 Lal24g0773 24 6002288 6007244 LSH
Lal20g0103 20 661122 667641 Lal24g0773 24 6002288 6007244 PCT
Lal13g1581 13 15651833 15652786 Lal24g0773 24 6002288 6007244 PCT