Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0753 TTTGATGTACCATCTAATGACCATGATATTGAAGAACTACAAAGAGATCATTTGGGTCATGCTGAAAAAACAAATGACTCAACTCCTTACAATGGACAAATATTTAACTCTGAAGAAAATGCATACATTTTTTACTGTTTATTTGCAAAGAGATGTGGTTTTTCTGTTAGAAGAGGTCACACTTATAAACGTAATGATTCAGATAACATTGAGTATATTTACAGAAGAGAGTTCATTTGTCATCGAGCTGGTATTGTCAACCAACAAAAAATTATTGAACCAGAAAAACAAAGGAAATGGAAAAGTTCAAGATGCAATTGTAGTGCAAAATTGTTTATTAGTAAAAGACCAATTAACTGCGAAGAACGTTGGGTGGTTATATATTTTAGTAATTCTCATAACCATGCATTATTGGACGATAAAGAAGTTCGGTTTCTTCCTGCTTATCGTGACATACCTAACAATGATCAAAGTCATATATTACTGTTATCTAAAGCTGGTTGCTCAATAAGTATTATAATGAGAGTGCTTGAATTGGAGAAAGGAATAGAGGCAGGCCATTTACCATATTTGGAGAAAGATATAAGAAATGTTTTACAATCTGAAAGTAGTGTTGGTAATGAAAATGATGTTTCAGACGTTCTCAAATTATGCAAAAAATTGAAAGATATAGACGATGCCTTTCAATATGATTTTACTATGGATGAAAGTAACAAATTGGAGCATATTATTTGGGTATTCGGTGATTCAATTCGAGCATATGAAGCTTTCGGAGATGTGGTTGTCTTTGATACTACATATCGAATAAATCGTTATGATATGCCTCTTGGACTATGGGTCGGGGTTGATAATCATGGTAATTCAATTTTCTTTGGATGTGTTCTATTGCGAGATGAGAAGATACCTTCTTTCAGATGGGCATTAAAGACGTTTTTACACTTTGTCAAGGGAAAATACCCAAGAACAATTCTCACGGATCAAGACCATGCACTTAAAGAAGCTATTTCAACAGAATTGTCAAACACAAAACATGCATTTTGCATATGGCACATTGTATCAAAGTTCCCAATTTCGTTTTCTTTCTCTTTGGGCCCAAAATATGACGACTTCAAATCCGAATTCTATAGGCTATACAATTTAGAATATGCAAGTGATTTTGAGCAACAATGGGAAATAATGGTTTACAACCTTGATCTAAGTAAAGATCATCATATTGTCTCATTGTATTCTCATCGCCAATTTTGGGCATTGGCATATTTGAAGGATTATTTTTTCGCTGGAATGACGACAACTGGACGTTCGGAATCTATAAATTCATATATTAAAAAATTCCTGCATGTCAACACGAGTTTGGTGGACTTTGTAAATCAAGTTGGAGTTGCCGTCAATATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGTCAAAAGTATCATAATCCTCAAATTAGAACAAGCTTTCCCATCGAGGAACATGCTTCAAATATACTCACACCTTATGTCTTTGAGTTACTCCAACATGAAATTGAGTTATCTTCAAAATATGCAGCAACTAAAATTGACAATGACTCTTACATAGTGCGACATCATACCAAGCTTAATGGAGGTCGGTTGGTAAGTCTAATAAAAGAGAAAGATGAAGAATCAATTCGCTGTTCTTGTAGAGAATTTGAATTTTGTGGGATATTGTGTAGACATGCTATTCGAGTGTTGTTGAAGAATGACTATTTCTGCCTCCCAGAAAAATATCTTCCTTCTCGATGGAGACGAAAGAGTTCATTGATCCCAAAATCTAGTCACATAACTATCTGCAATGATAAGTCATCCATTGAGTTTCAGTCTATGATGCAATGCCTAGAAGTTGAAACTTTGAAGACAAAAGATCGAGTTGTAGTAGCTACTAAAGAATTAGAGTGA 1917 0.3432 FDVPSNDHDIEELQRDHLGHAEKTNDSTPYNGQIFNSEENAYIFYCLFAKRCGFSVRRGHTYKRNDSDNIEYIYRREFICHRAGIVNQQKIIEPEKQRKWKSSRCNCSAKLFISKRPINCEERWVVIYFSNSHNHALLDDKEVRFLPAYRDIPNNDQSHILLLSKAGCSISIIMRVLELEKGIEAGHLPYLEKDIRNVLQSESSVGNENDVSDVLKLCKKLKDIDDAFQYDFTMDESNKLEHIIWVFGDSIRAYEAFGDVVVFDTTYRINRYDMPLGLWVGVDNHGNSIFFGCVLLRDEKIPSFRWALKTFLHFVKGKYPRTILTDQDHALKEAISTELSNTKHAFCIWHIVSKFPISFSFSLGPKYDDFKSEFYRLYNLEYASDFEQQWEIMVYNLDLSKDHHIVSLYSHRQFWALAYLKDYFFAGMTTTGRSESINSYIKKFLHVNTSLVDFVNQVGVAVNIRNQAGEEARMRQKYHNPQIRTSFPIEEHASNILTPYVFELLQHEIELSSKYAATKIDNDSYIVRHHTKLNGGRLVSLIKEKDEESIRCSCREFEFCGILCRHAIRVLLKNDYFCLPEKYLPSRWRRKSSLIPKSSHITICNDKSSIEFQSMMQCLEVETLKTKDRVVVATKELE 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0753 638 Pfam SWIM zinc finger 545 573 IPR007527 GO:0008270
Lal24g0753 638 SMART 26again6 550 577 IPR006564 GO:0008270
Lal24g0753 638 Pfam FAR1 DNA-binding domain 44 138 IPR004330 -
Lal24g0753 638 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 9 635 - -
Lal24g0753 638 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 635 IPR031052 GO:0006355
Lal24g0753 638 Pfam MULE transposase domain 260 353 IPR018289 -
Lal24g0753 638 ProSiteProfiles Zinc finger SWIM-type profile. 537 575 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0753 Lal-Chr24 5667664 5669749 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal24g0753 FAR1 1.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0753 - - var:108339217 860.522