Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0739 ATGATTTCTTCTGGGGTTAACTTGGTGATGACTGTTATTGGGTTTGTGGTGAGCACTATGTTCATTGTTTTTGTATGCACAAGGCTTATATGTGCTCGAGTTCACTTGAATTCTTCTAGGAGATCCTTTCCTGTAGCTGCCAGATCCAATCTCAGCATGATGGAACGGGGTTTCCATGGTCTTGAACGTGCAGCTGTAGCCAAATTTCCAAAAAAGAAGTACAGCGATAAGTTTTTTTCTGACACCGAAAATACTCAATGCTCAGTTTGCCTCTCAGAGTACCAAGGTGAAGATGTACTGCGTATCCTCCCCTATTGCGCACACTCATTCCATGTGACTTGCGTAGACATATGGCTACAGCAGAATTCAACTTGTCCCGTTTGTCGAATATCGTTGCGCGAATTTCCTGAGAGAAAGCAACTTATGCAACCCTTGTCCAGCTCCGCTTTGCGACCTCATTATAGCATGGAATCGTTTGACAGTGATCATTATTACTGTATGATGACTAATAATGGATTATCATCAACAATCCCTGAGAACAATCCGGCAAACACTACACCAGAGGATCATTTTCCACCTGACGGTGGTCTAGTACCTGCTAGGGACACTATCACCTGTTTAAGTCCGGGTAATCTCGTTAAAGATGAAGGGAAGAAGCATGTAGAGAGCCCATCAAATTTCTAG 684 0.4327 MISSGVNLVMTVIGFVVSTMFIVFVCTRLICARVHLNSSRRSFPVAARSNLSMMERGFHGLERAAVAKFPKKKYSDKFFSDTENTQCSVCLSEYQGEDVLRILPYCAHSFHVTCVDIWLQQNSTCPVCRISLREFPERKQLMQPLSSSALRPHYSMESFDSDHYYCMMTNNGLSSTIPENNPANTTPEDHFPPDGGLVPARDTITCLSPGNLVKDEGKKHVESPSNF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0739 227 SMART ring_2 87 128 IPR001841 -
Lal24g0739 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 134 IPR013083 -
Lal24g0739 227 PANTHER OS11G0150450 PROTEIN 1 226 - -
Lal24g0739 227 CDD RING-H2_PA-TM-RING 86 129 - -
Lal24g0739 227 Pfam Ring finger domain 86 129 IPR001841 -
Lal24g0739 227 PANTHER OS11G0150450 PROTEIN 1 226 - -
Lal24g0739 227 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Lal24g0739 227 SUPERFAMILY RING/U-box 81 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0739 Lal-Chr24 5519734 5524090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0739 45 183 C3H Transcription Factor Family AT4G10160 35.971 5.76e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0739 - - gmx:100794979 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0924 13 6478496 6482866 Lal24g0739 24 5519734 5524090 LSH