Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0715 ATGTCCGATACTTCCCAAACTTCATTCTTTCCCGGTTTCCGATTCCACCCTACCGACGAAGAACTCGTCCGATTCTACCTCAAGCGCAAACTCACCGGAAAATACTTCCGTTTTGACCCCATCGCTGAAGTTGATGTCTACAAAAACGAACCATGGGACCTTCCTCCCATGTCGAAATTGAAGACGAGGGATTTGGAGTGGTATTTCTACAGTGCACTGGACAAGAAGTATGGTAACGGCTCGAGGACCAAACGTATCACTGAGAAAGGTTACTGGAAAACTACTGGCAAGGACCGCACCGTTAAGCATGGCAGCCGCACCGTTGGAATGAAGAAGACACTTGTTTATCACGCTGGCCGTGCGCCTCACGGTGATCGCACCAATTGGGTGATGCATGAGTATAAGCTTGTGGATGAGCAATTGGCTCAAACTGGAATTCTGCTGGATGCTCTTGTGTTGTGTAGGATCTTCGAGAAGAGTGGTGCTGGTCCAAAAAATGGAGAGAAGTATGGTGCTCCATTGATTGAGGAGGAATGGGAAGATGATGAGGTAGCTCCTATGCCCGTTGCATGTGTTGAGGTGTCAAATAAAGCGCTTGCTGTTGAACCTATTGATTTTCTTGAAACTAGCGACCTTGAGAAGATTTATGTATATATTCTCGTGATCGCCATTCATGGATATCCTTTTGTAGTTTGGCAATTCCCCTCTCATGTGGTTTCTACTTCACACATGCTTGCTCTGGCTCTTTCTTGTTTTGTTGTTTTGTTTCATCTGAAGTGCCCAGCATTATTCACTTCTCTAATTTTAATTAATGCCTTCAATTACCAGAAAGTTGATGTGGTTGAGGCATTTGGAAATACTGGTCCACCATCAAGCTTCTATCACGGGGAGTGTAGTAGCTATCCCGAGGACATCCAAGGACCTATTACCGATCAGAAGCCATTGGAAGGTCGCAATGTTGGAGTTTCTGAGCCTCAAAGTGGCCAGCCTTTTAGTACTGCTGAGGAATATGCTGTGGATATCAATTCTATGAATGATGGTGACAGTGCTGAGCAGAGCAGTACTGAGAATGCTCTAGGTTTCACTTTTACTTTTGATGATCTAGATGTTTACTTGGATGCCACTGATTATCCTCCAGTTAAGGATACTGGATTGTTCCTGGAAACCAATGATCTTGTGAATCCATTTGAGGGTAATCCCACTGAGGCCGATCCTTCTGCTACTGCTATGCTAGATGAGTATCTTTCATACTCGGATGACGATATATCCAAGTATTTATCTTTTGATTCTCCAATCTCTATGGAAAGTGAAAATCTCGTTCCTGACCAGAAACCACATATCCAGCAGAATTTGGAGGGAGATACCAATGGTATTGCCATGGATAGCAAACATGATATTAAACCACCTTCTAGCAATGAGCCTACTTCAAAGCAGAATACACAGCCTCTATCAGGAAGTACACATCCATTTGTGAAGCAGGTGAATAAATTGTTGGCTGGCATACAAGCTCCTCCTGCATTTGCTTCAGAGTTCCCTTCTAAGGACATTGCTCTTGGGCTTCATCCTGCAGCCCAGTCTTCCAACTCAGCTCATGTAACTACAGGCATGATCAGCATCACAGACATTACTTCAGGAGGCAATGTGATGGATCAGATAGCGCGAAAGAATGGACGGTGTAACGCCATATTGTCAACTGAATTTTCTCAGTCTGATGTGTACTCTGTTGCATTGATGCCTGTTTTGGATGTGCTCTCTAGCAAGACTGCATTTGTGCTGTCCCATGACTGGATTTTCTTCATGATTATGCTCTTTCCACTTCTGGTTCTTTCACTTGTCTGCAAGTTTGGAAGTTTCACCTCTGCTGCTGGTAAATGA 1875 0.4416 MSDTSQTSFFPGFRFHPTDEELVRFYLKRKLTGKYFRFDPIAEVDVYKNEPWDLPPMSKLKTRDLEWYFYSALDKKYGNGSRTKRITEKGYWKTTGKDRTVKHGSRTVGMKKTLVYHAGRAPHGDRTNWVMHEYKLVDEQLAQTGILLDALVLCRIFEKSGAGPKNGEKYGAPLIEEEWEDDEVAPMPVACVEVSNKALAVEPIDFLETSDLEKIYVYILVIAIHGYPFVVWQFPSHVVSTSHMLALALSCFVVLFHLKCPALFTSLILINAFNYQKVDVVEAFGNTGPPSSFYHGECSSYPEDIQGPITDQKPLEGRNVGVSEPQSGQPFSTAEEYAVDINSMNDGDSAEQSSTENALGFTFTFDDLDVYLDATDYPPVKDTGLFLETNDLVNPFEGNPTEADPSATAMLDEYLSYSDDDISKYLSFDSPISMESENLVPDQKPHIQQNLEGDTNGIAMDSKHDIKPPSSNEPTSKQNTQPLSGSTHPFVKQVNKLLAGIQAPPAFASEFPSKDIALGLHPAAQSSNSAHVTTGMISITDITSGGNVMDQIARKNGRCNAILSTEFSQSDVYSVALMPVLDVLSSKTAFVLSHDWIFFMIMLFPLLVLSLVCKFGSFTSAAGK 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0715 624 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 377 620 - -
Lal24g0715 624 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 4 215 - -
Lal24g0715 624 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lal24g0715 624 MobiDBLite consensus disorder prediction 471 488 - -
Lal24g0715 624 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Lal24g0715 624 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Lal24g0715 624 MobiDBLite consensus disorder prediction 436 488 - -
Lal24g0715 624 MobiDBLite consensus disorder prediction 436 456 - -
Lal24g0715 624 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Lal24g0715 624 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 377 620 - -
Lal24g0715 624 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0715 Lal-Chr24 5349448 5353807 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0715 371 609 NAC Transcription Factor Family AT5G04410 29.918 1.37e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal24g0715 NAM 1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0715 - - lang:109338424 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0791 12 6156705 6160452 Lal24g0715 24 5349448 5353807 LSH