Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0704 ATGAGAATTGCAGTGGCTGGTGCTGATGATTTGTTGAGTGATAAAGCTACAAAGATGAGAGAATCTCTGCAAAAGAGTCAAACTATCACGGACAACGTTGTTTCCATTCTTGGTTCCTTTGACCACCGTCTCTCCACCCTTGAAACCGCCATGCGCCCTACTCAGATTAGGACTCATTCTATTAGGAAAGCTCATGAGAATATTGATAAAACTCTGAAGGCTGCAGAAGTCATATTGGTTCACTTTGATCAATTTCGTCAGGCAGAGGCAAAAATACTTCAAGGGCCACATGAAGACTTGGAAAACTATCTTCAAGCAATTGCTAAGCTGAGAAGCAACATTCAGTTTTTTGGCAGCATCAAGGGTTTTAAGAGTAGTGATGGTATCATCAACCATGCCAATAATTTGCTAGCTAAAGCTATTTCTAAGTTAGAAGATGAATTTAAGCAGCTATTATCATCTTACAGCAAAGCAGTGGAACCTGAGTGCCTCTTTGATTGCCTTCCAAACTCAATGCGACCTTCGTCAGGGTCGCCTGCCCATGAGCATGATCCTAGTGACAAGAATCATTCTAATCACCACTCTGAGGCACACAACAATATTGCTGATGATGTTGTATATACACCACCTACTCTTATACCACCAAGAGTTTTGCCACTGCTACATAATTTAGCTCAGCAAATGATTGATGCTGGTCATCGACATCAGTTACTCAAAATATACAGAGACACTCGTTCTAACGTACTAGAAGAGAGCCTCCAAAAGCTTGGGGTGGAAAAACTCAACAAAGACGATGTTCAAAAGCTTCAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCTGTAAAATTGTTATTTGCTGGTGAAAGGAAAGTTTGTGATGAAATATTTGAAGGATTTGGTTCTCTCAGTGAACAATGTTTTGCTGAGGTGACTACAAACAGTGTTTCTATGCTACTTAGTTTTGGAGAAGCAATCGCCAAAAGCAAGAGATCCCCTGAAAAGTTATTTGTGCTTTTGGACATGTATGAAATAATGCAAGAGCTCCATTCAGAGATGGAAATACTCTTTAAAGGCAAAGCTTGCACGGAAATAAGAGATGCCGCAATGGGTTTGACAAAACAACTTGCGCAAACAGCCCAAGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACGAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTCATTAACTACGTTAAGTTTTTATTTGACTACCGATCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGTACAGAGGATTCTCCACAGCTAGCGTCTCTAACAATGCGCATAATGCAAGCTTTGCAAACAAATTTAGATGGGAAGTCAAAGCAGTATAAAGACATCGCCTTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTTAGATCAGTTCGGAGGTCTGAAGCCAAGGACTTGCTGGGAGATGATTGGGTACAGAGACATAGGAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGTCTATCTATCCAGGGCCTTAACTCATCAGGCGGTGGGAGCGGTACTGCTGGTGATGGTGGAACTGGAAGTAGCAGTGGTGCTTCAAGAGCAGTTGTTAAAGACCGGTTTAAGACATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCCGACAGCGAATTGCGAGAGTCTCTCAGGCTTGCCGTTGCTGAAGTCTTGCTGCCTGCCTATAGATCATTCGTGAAACGCTTCGGGTCTCTAGTGGAGAGTGGAAAAAGTGCTCAGAAGTACATCAAATACACGGGGGAAGATCTAGATCGAATGTTGGGTGAATTTTTCGAAGGAAAAAACACGAACGAAACCAAGCGCTAA 1962 0.4149 MRIAVAGADDLLSDKATKMRESLQKSQTITDNVVSILGSFDHRLSTLETAMRPTQIRTHSIRKAHENIDKTLKAAEVILVHFDQFRQAEAKILQGPHEDLENYLQAIAKLRSNIQFFGSIKGFKSSDGIINHANNLLAKAISKLEDEFKQLLSSYSKAVEPECLFDCLPNSMRPSSGSPAHEHDPSDKNHSNHHSEAHNNIADDVVYTPPTLIPPRVLPLLHNLAQQMIDAGHRHQLLKIYRDTRSNVLEESLQKLGVEKLNKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDEIFEGFGSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEMEILFKGKACTEIRDAAMGLTKQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGTEDSPQLASLTMRIMQALQTNLDGKSKQYKDIALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLNSSGGGSGTAGDGGTGSSSGASRAVVKDRFKTFNIMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGSLVESGKSAQKYIKYTGEDLDRMLGEFFEGKNTNETKR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0704 653 Pfam Exo70 exocyst complex subunit 280 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal24g0704 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 649 IPR004140 GO:0000145|GO:0006887
Lal24g0704 653 MobiDBLite consensus disorder prediction 174 196 - -
Lal24g0704 653 MobiDBLite consensus disorder prediction 180 196 - -
Lal24g0704 653 Gene3D Exocyst complex component Exo70 76 653 - -
Lal24g0704 653 SUPERFAMILY Cullin repeat-like 81 644 IPR016159 -
Lal24g0704 653 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0704 Lal-Chr24 5243398 5252627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0704 3 653 EXO70 exocyst subunit family AT5G03540 73.599 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0704 K07195 - gmx:100813987 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0704 24 5243398 5252627 Lal24g0704 24 5243398 5252627 ECH
Lal12g0785 12 6103806 6112407 Lal24g0704 24 5243398 5252627 LSH
Lal13g0891 13 6130893 6142123 Lal24g0704 24 5243398 5252627 LSH