Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0665 ATGAAGTCAGTGATTGGAGGAAGTTCATCAGAGACATCTAGTGAAGAAGCTGATCATCAGAAAGAAGACCAAGATGATTCTACAAGTTCCAAACGTTCATTTGATTGCACATTCTGCAGGAGGGGCTTCACCAATGCTCAAGCTTTAGGAGGTCACATGAATATTCATAGAAAAGATAAAGCCAAAGCCAAACAAGGCACACCAAACAATTTATTTACCAAAGAGGAATACATTATGGTCCCTTCTTTTATTCCTCAAACCTCAACTTTTTGCTCCATGTTTGAGTCTCAAAGAAACTATGACATCCATTTTCAACCATCTTCAACAACTAATTATTCTAGAAACCCACCTGCTTATGCATTTCAATATGATCAATTTCTTAATCCCACAAGGTATGAATCTTTGAGTACAAATTATCAACAGCTTTTGGGTCCCAATTTGACTCTCCAAATTGGTCCAAGTCATGTGAGTACTGATGAAGTTAGAAAAGGGATTCAGAATGATGGTGAAGTTGTGGACTTGGAGCTTAGGCTTAGCCATTATCCATACTCAAACTAG 558 0.3781 MKSVIGGSSSETSSEEADHQKEDQDDSTSSKRSFDCTFCRRGFTNAQALGGHMNIHRKDKAKAKQGTPNNLFTKEEYIMVPSFIPQTSTFCSMFESQRNYDIHFQPSSTTNYSRNPPAYAFQYDQFLNPTRYESLSTNYQQLLGPNLTLQIGPSHVSTDEVRKGIQNDGEVVDLELRLSHYPYSN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0665 185 SUPERFAMILY beta-beta-alpha zinc fingers 31 61 IPR036236 -
Lal24g0665 185 MobiDBLite consensus disorder prediction 14 30 - -
Lal24g0665 185 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 182 - -
Lal24g0665 185 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Lal24g0665 185 MobiDBLite consensus disorder prediction 1 32 - -
Lal24g0665 185 Gene3D Classic Zinc Finger 8 82 - -
Lal24g0665 185 PANTHER OS07G0101800 PROTEIN 11 182 - -
Lal24g0665 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0665 Lal-Chr24 4921014 4921571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0665 8 100 C2H2 Transcription Factor Family AT2G37740 42.157 5.77e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal24g0665 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0665 - - lang:109360170 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0665 24 4921014 4921571 Lal24g0665 24 4921014 4921571 ECH