Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0664 ATGTTAGGTTTAGCCCTTAATTTGTTTCTTGTGAGGCTAGCAACTCTGGCTAACCCTTGGTGGACGAGTCAGGTGGGGTTATCTGGGGTTGACCACTCAGGAAGCCATTCACCTGGCTTCATGAGCAAACCCCAGACGAACCTCACAATCAACGAAACAAATAGCGGTGGCAACAACCGAGATCTCGAAGATGAAGACAACAAGGGGGATGATCAAGAACCAAAAGAGGGTGCAGTTGAAGTTGGAAACCGAAGACCAAGGGGAAGACCAGCTGGATCAAAGAACAAACCAAAACCACCAATCTTTGTGACAAGGGACAGCCCAAATGCCCTAAAAAGCCATGTGATGGAGATAGCTGCAGGTGCTGATGTTGCTGAATGTGTAGCACAATTTGCAAGGAGGCGCCAGTGTGGGGTATGTGTCCTTAGTGGGAGTGGCTCTGTGGCTAATGTCACCCTTAGACAACCATCTGCTCCAGGTGGTGCTGTTGCACTTCATGGCAGGTTTGAGATCCAAACCTTAACTGGTGCATTCTTACCTGGACCTTCCCCTCCCGGGTGCACCGGACTCACGGTGTACCTTAATGGAGGGCAAGGTCAGGTTTTGGGAGGAAGTGTTGTTGGGTCTTTAGTAGCTGCTGGACCTGTTATGATCATTGCTGCAACTTTTTCTAATGCAACTTATGAGAGATTGCCACTTGATGATAACAACGATGAGGGGCCAAGTGGTGCTGTGGCCTCACACGATGGCGGCACCGTTGGATTATCACCACCGCGGCCACCGGGAATAGGAAGCATGAGTGGGGGTCAGTTGCAACAGGCTGAGATTCCAGATTCATCAGTATCTCTTCCTTCATATAATCTGCCACCAAATCTGTTGCATAATGGAGGGCAAATGGGGCATGAAGCTTTTGCTTGGGCTCATGGAAGGCCACCTTATTGA 942 0.4968 MLGLALNLFLVRLATLANPWWTSQVGLSGVDHSGSHSPGFMSKPQTNLTINETNSGGNNRDLEDEDNKGDDQEPKEGAVEVGNRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEIAAGADVAECVAQFARRRQCGVCVLSGSGSVANVTLRQPSAPGGAVALHGRFEIQTLTGAFLPGPSPPGCTGLTVYLNGGQGQVLGGSVVGSLVAAGPVMIIAATFSNATYERLPLDDNNDEGPSGAVASHDGGTVGLSPPRPPGIGSMSGGQLQQAEIPDSSVSLPSYNLPPNLLHNGGQMGHEAFAWAHGRPPY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0664 313 CDD DUF296 112 223 IPR005175 -
Lal24g0664 313 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 225 IPR005175 -
Lal24g0664 313 ProSiteProfiles PPC domain profile profile. 108 244 IPR005175 -
Lal24g0664 313 MobiDBLite consensus disorder prediction 31 108 - -
Lal24g0664 313 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 313 IPR014476 GO:0003680
Lal24g0664 313 PIRSF ESCAROLA 25 313 IPR014476 GO:0003680
Lal24g0664 313 MobiDBLite consensus disorder prediction 58 83 - -
Lal24g0664 313 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 235 - -
Lal24g0664 313 Gene3D - 112 238 - -
Lal24g0664 313 MobiDBLite consensus disorder prediction 232 283 - -
Lal24g0664 313 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 21 313 - -
Lal24g0664 313 MobiDBLite consensus disorder prediction 38 57 - -
Lal24g0664 313 MobiDBLite consensus disorder prediction 266 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0664 Lal-Chr24 4911793 4912971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0664 16 313 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 58.442 1.06e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0664 - - lang:109359790 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0664 24 4911793 4912971 Lal24g0664 24 4911793 4912971 ECH
Lal13g0858 13 5847994 5848905 Lal24g0664 24 4911793 4912971 LSH