Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0650 ATGAATTCAGAGAAGCTAGTGAGCAATAATGAGATTTCAAGTGAAGAAAGTGATCACCAAGAAGAAGCACAAGATGACACTGAAGGGACAAAACGCTCTTATGAGTGCACATTTTGCAAGAGAGGTTTCACAAATGCTCAAGCCTTAGGGGGTCACATGAATATCCACAGAAAAGATAGAGCCAAGGCTAAGCAAGTGATCACAAACCAAACCAATCAGGAATATTTCATGGCCCCTCCTTTTGCTTCAGGGTTTTCTAACCAAACCACAAGGCATTACTCCATTTTGGAGCCTCAAAGTAATTGCAACATGTATTTTCATCCACCACCAACACCAAATCATTTTAGAGACCAACCTTCATATGCACCAAATACCCAGCTTCAATATGATCAATGTCATAACCTAAGCTCTAGGCCTATGAATTTGAACCAATTAGAACTTAGGGGTGCAAATTTGAGTCTACAAGTTGGTCCAAGTCATGTGGATAATTATACTAATCAAGTTAGGACAGGAACTCAAGAAGATGATGAAGTGGATTTGGAACTTAGACTTGGCCATGATCAATACTAA 570 0.3947 MNSEKLVSNNEISSEESDHQEEAQDDTEGTKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQVITNQTNQEYFMAPPFASGFSNQTTRHYSILEPQSNCNMYFHPPPTPNHFRDQPSYAPNTQLQYDQCHNLSSRPMNLNQLELRGANLSLQVGPSHVDNYTNQVRTGTQEDDEVDLELRLGHDQY 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0650 189 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 12 188 - -
Lal24g0650 189 MobiDBLite consensus disorder prediction 1 31 - -
Lal24g0650 189 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Lal24g0650 189 PANTHER OS07G0101800 PROTEIN 12 188 - -
Lal24g0650 189 Gene3D Classic Zinc Finger 12 80 - -
Lal24g0650 189 SMART c2h2final6 34 56 IPR013087 -
Lal24g0650 189 Pfam C2H2-type zinc finger 34 58 - -
Lal24g0650 189 SUPERFAMILY beta-beta-alpha zinc fingers 31 60 IPR036236 -
Lal24g0650 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0650 Lal-Chr24 4800256 4800825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0650 25 83 C2H2 Transcription Factor Family AT3G09290 55.932 6.78e-17 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal24g0650 zf-C2H2_6 2e-05 CL0361