Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0639 ATGGCCAATAATAATATTAACAATTTCAACAATTATTCTGTCACCTTTGACCATCATGGTACCCGCATCTTTACATGTGGAGTATGCAACAATGTTTTCAATGACCCACTTACATTCATTAGGCACATTGAGTCTCATGTTGCTCCTGAAAGTGCTGCTATCAGAATGCTTAGACGTAATTTCAATAGGTCCATGTTGTTACAAGAGATTAGAAACCTTAATGCTAGAAGGGTTTCACAACCATTACCACAACTACAACAACAACATCAACAAAGAACAAGACCACTTCTTTATGCTAATCACGTTGCTGCTTCACACCCAGTTCAACCACCAAGATCATTTCAACCTGAGATGTTACCTTTTCATAGGAATGTTATGGCTCCAATGGCACGATCATCACTTGCTACACCAGTTCAACAAGAGATTCAAATGGATGTGTCTCCAATAGATGGGACTAGACCTTTTATTAACCTTCTAGACAAACCCATTCAAAACAATGAGGTTGGTAATATGGTTAACATGTATGCTTTGCAAAACATTGATCTCACATTAAGGCTCTAG 561 0.3797 MANNNINNFNNYSVTFDHHGTRIFTCGVCNNVFNDPLTFIRHIESHVAPESAAIRMLRRNFNRSMLLQEIRNLNARRVSQPLPQLQQQHQQRTRPLLYANHVAASHPVQPPRSFQPEMLPFHRNVMAPMARSSLATPVQQEIQMDVSPIDGTRPFINLLDKPIQNNEVGNMVNMYALQNIDLTLRL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0639 186 SUPERFAMILY beta-beta-alpha zinc fingers 11 46 IPR036236 -
Lal24g0639 186 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Lal24g0639 186 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0639 Lal-Chr24 4700909 4701469 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal24g0639 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0639 - K09228 pvu:PHAVU_007G056300g 77.4109