Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0628 GCAGATCACAGACTGCAAGGTTTAAGGGACAGAATTTTCCCTTCTAAAGGAAAAAATGCTAAGGTACCTGAAAATGCACCTTCAGTTACATTGCCAACAAAATCAAAGGAGGGCTCTCTATCTTCACTGAAGGCTGAAGCAAGAAAAGCCAAAGCGGCTGCAAAAAAAGTTACCACTCCGAGAGATGAAAAATGCGGTGGGATAGAAAATTTGGACGAAGTTTCTACAATTCTATCTGCAAGAAGAGCTAAAGTTGCAGCAAGAAAAAAATTTATTCAGAGAGAATCCAGTCCTACTTGTCAATCTTACAAAGTAACAAGAGATGAAAAGGAATATGATGGCTATTCCAAGCTTCAAACTTCAAATGGAACTTCCAAATCCAGAGTTCAGAACACTTCAAAACCAGAACTCAGTAAACAAAAAGTGCCTAAGAAGAATTCAGAGGGCAGTGCTGAGTTATGGAAAGATAAAGCTGAAATGTCTGAGCCATTAACTTCTCTGGTGGAAGCTGTAAGAAGAAATAAGTCAAGTAATAAGTCTCCTATGAAAGAAATTGCTGTCATTCCTGTGCCTGAGGACTCTAGTGACAGTGATTTTCAGGTGCCTAAGTTCCAAGTTAAGAATCATAGTCACACTGGTGGTAAGAGAGATTCAGACTCTACCAAACTCAGAAGGTTGCAGGACACTGAAGAAAGAACAGTTAAATTCTATGGGGACTTGAATCTTCCAGCACCAGCACCTTTGATTGTTTCAAGCAGTGAAAGCAACAACAAATTTGGAAACCTTTCTGCACAACCTATGATTGGTTCAAGCGGTGTATTTGGCGGTCCAGTCTGGTTCTCCTTGGTTGCTTCTGAAGACAAGGAAGAAGGTGCAAGATTGCCTCAAATATCTTCTTGTTTCATAAGAGTCAAGGATGGTAGTTTGCCTGTCTCCTATATAGAAAAGTATATCGCGAAGAAGCTTGGTCTTCCCAGTGATGCAGAGGTGGAGATCTCATTATGGGGTCAGCCAGTTTTATCTTCATGGAAACTACAAAACTTAGTAGAGATGTGGTTGCAAACAATGCCAAAGGATGAGAAGATTCACACATCTGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCATATGGACTATAG 1146 0.4031 ADHRLQGLRDRIFPSKGKNAKVPENAPSVTLPTKSKEGSLSSLKAEARKAKAAAKKVTTPRDEKCGGIENLDEVSTILSARRAKVAARKKFIQRESSPTCQSYKVTRDEKEYDGYSKLQTSNGTSKSRVQNTSKPELSKQKVPKKNSEGSAELWKDKAEMSEPLTSLVEAVRRNKSSNKSPMKEIAVIPVPEDSSDSDFQVPKFQVKNHSHTGGKRDSDSTKLRRLQDTEERTVKFYGDLNLPAPAPLIVSSSESNNKFGNLSAQPMIGSSGVFGGPVWFSLVASEDKEEGARLPQISSCFIRVKDGSLPVSYIEKYIAKKLGLPSDAEVEISLWGQPVLSSWKLQNLVEMWLQTMPKDEKIHTSVGSSAKDFVMVLSYGL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0628 381 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 380 IPR044807 GO:0004842
Lal24g0628 381 MobiDBLite consensus disorder prediction 88 157 - -
Lal24g0628 381 MobiDBLite consensus disorder prediction 1 42 - -
Lal24g0628 381 MobiDBLite consensus disorder prediction 116 137 - -
Lal24g0628 381 MobiDBLite consensus disorder prediction 138 157 - -
Lal24g0628 381 MobiDBLite consensus disorder prediction 1 17 - -
Lal24g0628 381 MobiDBLite consensus disorder prediction 26 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0628 Lal-Chr24 4611273 4613190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0628 294 381 C3H Transcription Factor Family AT3G23060 51.136 3.28e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0628 K16277 - gmx:102669950 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0628 24 4611273 4613190 Lal24g0628 24 4611273 4613190 ECH
Lal24g0628 24 4611273 4613190 Lal1g1906 1 21282004 21293960 ECH
Lal12g0708 12 5341956 5343928 Lal24g0628 24 4611273 4613190 LSH
Lal13g0811 13 5460658 5462631 Lal24g0628 24 4611273 4613190 LSH