Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0613 ATGAAAATGCTCTTTTCAGCACTACCCCTTCTCTTCTCTCTCCTTGTATTCTTCTCAAACCCAACATGGGTATGTGGGAATGAAGAGTTAAGAGCACTCATGGACTTAAAAGCAAGTTTGGATCCAGAAACCCTTTATCTATCTTCATGGACTAATAATGGAAAACCATGTAGTGATTCCTTTGAAGGAGTAGCTTGCAATGAGAAGGGTCAAGTTGCAAATATTTCTCTTCAGGGAAAAGGTCTCTCTGGGAAGCTTTCACCAGCCATTGGTAGACTCAAGCATTTAACAGGACTCTACTTGCATTATAATTCTTTGTATGGTGAGATACCAAGAGAGCTTGCAAACTTGACTGAGCTAGTTGATTTGTATTTGAATGTGAATCATTTGTCTGGAAATATCCCTTTTCAGATCAGCTACATGGAGAACTTGCAAGTGTTGCAGCTTTGTTATAATCGGTTGGCGGGAAGCATACCTACTCAGATTAGTGCTTTGAAAAAACTTAGTGTTGTCGCAATGCAATCAAACCAATTAACCGGTGCAATCCCTGCCAGTCTAGGTGAGCTGACTATGCTGGTGAGGCTAGATTTGAGCTCTAATAATCTCTTCGGTTCCATTCCGTCTAGCCTAGCTGAAGCTCCTTCACTGAAAGTTCTAGATGTTCACAACAATTCTCTTTCTGGAAATGTACCTCTTGCTCTGAAGAGACTAGATGATGGATTTTCGTATGAAGGGAATCTTGGATTGTGTGGTGTAGGGTTTTCGTCTTTGAAAACTTGCAATGCTTCAGATCATGTGAATCCTAGCAGACCTGAACCTTATGGAGCATCAACAAGAGATATCCCCGAAACTGCTAACGTAAACTTGCCTTGCAAGGGGACTCGGTGCCTAAAATCTTCAAAATCCAATCATGCAACATCTATTACTGTTGGCACAATTGTGGCTTTAGTTGCAATGTCGGTAATTGGTGTTTTGGCCTTCACGATGCATCGTAGGCGAAAGCAAAAGCTTGCAAGTTCTTTTCAGATCTCTGATGGCCGTCTAAGTACCGATGAAGCCAAGGGTACATACCGGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTACTCTAAAGGATGGGACCCTTTGGCTGATAGTAGGAATTTCAATGAGGATAGCTATGATATGTTCAAGAGTTTCAGGTTCAACTTGGAAGAAGTGGAGTCTGCTACTCAGTATTTCTCCGAGTTGAATTTGTTGGGTAAGAGTAACTTCAGTGCAACATATAAAGGAGTTTTAAGAGATGGATCAGTTGTTGCTGTGAAGAGCATCAGTAAAACTAGTTGCAAGTCAGATGAAGATGAGTTTTTGAAGGGATTGAGCACTTTGACCTCACTGAGAAGTGATAATTTAGTGCGGTTGAGAGGATTTTGTTGTTCACGGGGACGAGGTGAATGCTTTCTGATCTATGATTTTGTTTCTAATGGAAATTTGTCGCGCTTCCTTGATGTGAAGGAAGGCGATGGAGAAGTCCTTGAATGGTCAACCAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGCATAGCATATTTACATGCATACAAAGCAAACAAGCCAGTTCTTGTTCACCAAAACATCTCAGCTGAGAAAGTTCTCGTTGATCATCGGTACCATCCGTTGCTAGCAGATTCCGGAGTGCACAAGCTTCTTACTAATGACACTGTCTTCTCATCACTCAAGGCTTGTGCTGCAATGGGTTACCTGGCTCCGGAATACACCACTACTGGCAAGTTCACAGAGACAAGTGATGTTTATGCTTTCGGGGTGCTGGTTTTCCAAATCCTCTCAGGGAAGCAGAAAATCACTAGCTCAATAAGACTTGCAACAGAGTTCTCCAGATTTCAAGAGTTTATTGATCCAAATCTCAATGGCCGATTCTTCGAATACGAAGCAGCTAAGTTAGCAAAAATAGCTTTTCTTTGCTGCCATGAGTCTCCTTTTGAGAGACCATCTATGGAAGCAATTGTTCAAGAACTCGGAAATTGTAGTAGCTGTCTCTGA 2040 0.4181 MKMLFSALPLLFSLLVFFSNPTWVCGNEELRALMDLKASLDPETLYLSSWTNNGKPCSDSFEGVACNEKGQVANISLQGKGLSGKLSPAIGRLKHLTGLYLHYNSLYGEIPRELANLTELVDLYLNVNHLSGNIPFQISYMENLQVLQLCYNRLAGSIPTQISALKKLSVVAMQSNQLTGAIPASLGELTMLVRLDLSSNNLFGSIPSSLAEAPSLKVLDVHNNSLSGNVPLALKRLDDGFSYEGNLGLCGVGFSSLKTCNASDHVNPSRPEPYGASTRDIPETANVNLPCKGTRCLKSSKSNHATSITVGTIVALVAMSVIGVLAFTMHRRRKQKLASSFQISDGRLSTDEAKGTYRKNGSPLVSLEYSKGWDPLADSRNFNEDSYDMFKSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEDEFLKGLSTLTSLRSDNLVRLRGFCCSRGRGECFLIYDFVSNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGIAYLHAYKANKPVLVHQNISAEKVLVDHRYHPLLADSGVHKLLTNDTVFSSLKACAAMGYLAPEYTTTGKFTETSDVYAFGVLVFQILSGKQKITSSIRLATEFSRFQEFIDPNLNGRFFEYEAAKLAKIAFLCCHESPFERPSMEAIVQELGNCSSCL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0613 679 SUPERFAMILY Protein kinase-like (PK-like) 382 672 IPR011009 -
Lal24g0613 679 Pfam Protein tyrosine and serine/threonine kinase 411 672 IPR001245 GO:0004672|GO:0006468
Lal24g0613 679 SUPERFAMILY L domain-like 25 235 - -
Lal24g0613 679 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Lal24g0613 679 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 677 - -
Lal24g0613 679 Gene3D Phosphorylase Kinase; domain 1 376 485 - -
Lal24g0613 679 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515
Lal24g0613 679 Gene3D Ribonuclease Inhibitor 141 260 IPR032675 -
Lal24g0613 679 ProSiteProfiles Protein kinase domain profile. 407 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0613 679 Gene3D Transferase(Phosphotransferase) domain 1 486 678 - -
Lal24g0613 679 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Lal24g0613 679 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0613 Lal-Chr24 4472960 4476477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0613 10 520 Miscellaneous Gene Families AT4G22730 54.476 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lal24g0613 PK_Tyr_Ser-Thr 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0613 - - gmx:100775422 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0758 9 5303575 5306999 Lal24g0613 24 4472960 4476477 PCT
Lal24g0613 24 4472960 4476477 Lal9g0758 9 5303575 5306999 PCT