Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0607 ATGGCTTCAAAGAATGACCAAAGTGCAATTGAGCTCCTTAATGGTGAAGCTATCCTACACAGCCAGTTATTCAGCTTCATAAGACCCATGTGTCTTAAATGGGCTGTGGAACTTGGCATAGCAGACATAATCCATAACCATGGCAAACCTATCACTATTCCTGAGTTGATCTTAGCCCTAGTTCAAGTTCCACCAGCTAAAGCTTCTTTAGTGAAACGTTTCATGCGCTTCCTTGCACATAATGGAATCTTTGAAATCCATGAAAGCCTAGAAGAAGAACATGAAACATATAGTTTGACACCAGCATCAAAGCTTCTTGTCAATGGCAGTGATCATTGTTTAACTCCATTTGTTCTATGGGCTACAGATCCTGTTAGAATAAATAACTATCATCACTTAGGGAATTGGGTTTGTGGTGAAGTTCCTACTTTATATGAAACTGCATTAGGAATAAGTCTTTGGGAATATCTTGATAAAAACCCTGAATATATGAGTAGATTTAATGAGGGTATGGCAAGTGATTGTCAACTACTGAAGTTGACTTTGAAAGATTGTAGTTCTGTTTTTGAAGGGTTAGATACCATTGTGGATGTAGGTGGTGGAAATGGAACTGTAGCCAAAATCATTTCTCAGTTATTTCCTAAGTTAAAACTTGTTGTATTTGATCTTCCACAGGTTGTAGGAAACTTGTCAGGAACCAATAATGTGAGTTATGTTGCTGGTGACATGTTTGTCTCTATCCCTCAAGCTGATGCAGTTGTACTAAAGAGGATTTTACACGATTGGACTGATGAGGATTGCATAAAGATCCTTAAAAAGTGTAAAAACTCTATTTCAAGCAAAAAAGGAAAAGTGATTATTATAGAGGCAATAATAAATGAAAATCAAGAAGACAAAGTTATGACTGAAACAAAGTTGACCACTGATATAATGATGATGACTATTAATGGAAAAGAGAGAAATGAAAAAGAATGGAAGGAACTCTTTGTGGCAGCAGGATTCAAACACTACAAGATATATCAATTACATGGTTTGAGATCTCTTATTGAGGTCTATCCTTAG 1062 0.3625 MASKNDQSAIELLNGEAILHSQLFSFIRPMCLKWAVELGIADIIHNHGKPITIPELILALVQVPPAKASLVKRFMRFLAHNGIFEIHESLEEEHETYSLTPASKLLVNGSDHCLTPFVLWATDPVRINNYHHLGNWVCGEVPTLYETALGISLWEYLDKNPEYMSRFNEGMASDCQLLKLTLKDCSSVFEGLDTIVDVGGGNGTVAKIISQLFPKLKLVVFDLPQVVGNLSGTNNVSYVAGDMFVSIPQADAVVLKRILHDWTDEDCIKILKKCKNSISSKKGKVIIIEAIINENQEDKVMTETKLTTDIMMMTINGKERNEKEWKELFVAAGFKHYKIYQLHGLRSLIEVYP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0607 353 Gene3D Vaccinia Virus protein VP39 108 353 IPR029063 -
Lal24g0607 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Lal24g0607 353 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
Lal24g0607 353 Gene3D - 1 106 IPR036388 -
Lal24g0607 353 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Lal24g0607 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 353 IPR016461 GO:0008168
Lal24g0607 353 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 352 - -
Lal24g0607 353 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Lal24g0607 353 PANTHER O-METHYLTRANSFERASE 2 352 IPR016461 GO:0008168
Lal24g0607 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0607 Lal-Chr24 4441823 4443873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0607 8 339 Monolignol Biosynthesis Gene Families AT5G54160 33.431 1.61e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0607 K22588 K13262 gmx:100819796 454.521