Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0588 ATGAAAGGCCGATCTCACCGCCCTCATAACACCGACCCACCGGAAGATTGGGGCGATGGTTCTTGGACGGTGGACTGCATCTGCGGTGTCACCTTCGACGACGGCGAGGAGATGGTTAAGTGCGATGAGTGCGGCGTCTGGGTCCACACGCGCTGCTCTCGCTACGTCAAAGGCGAGGATACTTTTGCCTGCGACAAATGCAAGGGAAAGACCGCGGCTGCCGTCTCCGCCATGCACAACACCGAGGAAACCGAGGTGGCTCAGTTGTTAGTTGAGCTTCCTACAAAGACAATCTCAATGGAGAATCAAAACAAACATAATCAAACTGCGGCCGCGAGGGTTGCTTCTTCTCGATCGCGGCTACCGTTGAAGCTTTGGAATGAGAAACCTATTGAGGATAGAGTTCATGTTCAGGGGATACCGGGCGGTGATCCTGCAATTTTCGCTGCGCAGGGAACGCCTTCCATTTTTGGTCCTCAGTTATGGAAATGTACTGGTTATGTTCCGAAGAAGTTTAATTTTCAGTATAAGGAGTTTCCTTTTTGGAATAATGATAGTGATAATGATAATGGGGCTGGAGTTTTATTCTCTTTTTCGAAAGATACTGGTATTGTTTTGGCATCACCAGTTGTGGCTTTGGTTGATATGACATCTGAAGAGAAGACAATGGAGGCCAAGGCTTTGAAGGAGGTGGATATGGTTGGGAGTGAAGATGTGTTGAATGTGCAAAATGGTGTCAGTAAGGAGAGGGCTTTTCTGAGGCCTTTTGTTCATAGCAGCAAAAAAAAGAAAGAAGAGTTGGGGCCTTCCCAATCCAAAGATCGGAGTGGGAAGCAACAGCGGGTGAAGGTCGCTGAGAAAGAGGATGATCCCAAGAGGAGAAGTTTACATTCTTCTAAAATAGTATTTACGCCTGCCAGTGATGCAAAACAATTGGAATCTTGTGAAGAAAGAGGCCTGAAGATTTTCAAGGCTGACTCTCGGAGTATAAAGAATAAAAATTTAAAAGACACAGTGGTTCAGGGACGTATTTCCAATTGCCATTTTGTTGTAGATACCATCCTAGAAGAGCCAAATAACAACATGACGACTACTGAGGACTCATTAGATGCATTACATCATGACACGACAAGACATGAAATTTCTGTTGGAGAGGCCTTAGCAGAAGAGAAAATTGGCCATAAAGCTCCTAGTTTGGTTGAGATGCCTTCTATGATGGACAACACTGTTACATCAGTTTTAAAGCCTGATAGCATTGAAAATGCTTCAATTAAAGAAAAAGGCGGAGATTTCTTGGCAGTTGATAATGCAGACAATGCTTTAGCTGTAAGAAGCTCTATGAGTCCTCACATGGATGACCTTTGTAGTTCTGCACCAGAACTTAGGGATAACCGAGTTTCTCAAGAACTTAACTGCAACCCGCATCCCATCTCGGAAAAATGCAAGGCCAAGTTGAAGAGAGAAGATGATGATGATTACTGTAGGAAGCATCTGCAATTTCATTCTTCTCCAGTTAATGATCTTAAAAATAATGAAAAACCATCTGATCACATATCTGATATTGGTAATGCAAATGTTGCTGTTGTCACCAGTTTAACATCACATGATAAAAAGGTGGGAGTTGTTGAAAGAGTATTAGAGCTAGTTGCCAATGATCATTCCAATGAAGTTGATGCATTGTCTGTTGATATTTGTCATGAAAAACAAGAACCAGAGGGGTTTGAAGGTTCCGTTGAAGCACAAAAGGGATTTTCAGAAGCAAAAGATGGTTCGGATTCTGCAAGCGATACATCAAAAGCTGAAACACTTGAACGTCCTGACAAAATGTTAGCATCTCCTAGAAAGTCATCTCCAACTTCATCGACCTCGAACTCCAAATCACTGGCTTGTGACTTAAAATCTGAGGATACTGAAAACCCTAATCCTCTTACAAAGCTCAGAGTCGTGACTGATATTAACATTCACTACAAGAATGAAAGTTGTCCGAGTGATGCTTTAAGGGATGGAATTTCAAGGAAGTCAGTAAAAGAGCGTCCAAAATCCTCTTTGAATTCTAATGTAAAAGGGCCGCATGCAAGCAGGAGTGTACAAAGTTCAGTATCTAAGCAAGTAACTCCTGATGTGGGAGATTCAGTTCACTGTTTATCTTCTAAAGCATCTTTGGTATATCAGGCTGCAAGTATTGTAGGCTCAAGTGAAACTCATGCATTATCGAACCATCAAAAGGCTTTGCAAGTGCAGCATAAAGTTTCTTTTTCAGACCAACAGACAGTTGAAAAGCCTAACCAGACAAAGAATCATCCTTCCTCTAAGTTGAACCAGAACCATGCAACAAATCCTTCTCCCTTATCAAATTCTTCGATGCTGAGTGATGAAGAGCTTGCTTTGCTATTGCATCAAGAACTAAATAGTTCACCTCGAGTACCTCGAGTACCCCGAGCACGCCATGCTGGTAACTTACCGCAATTGACTTCTACTTGTGCTACAAGCATTCCAATGAAGCGAACATTATCTGTTGGAGGAAAGGATCATCATTCTTTGGTACCTAGACGAAAATACAAGGATGCATCTAGAGATGAACCTTGCAGTTCTCGCGATCATGAAGATGGAGGTAAAAGGATGGAGAAGGAGAAGGTTTCATCCTCCTCTGATCAGAGGAAACAAGACATGTCATATGTAGAAAATGCTTCTGTAAAGGAAGAAGGTCTTACATCTACGACAGCCATCAACTCTACAAACAATGTTATTTCTGCCACCTCTGCCATTGCAAAAAGTAGTTCACCTTCCTCTCTTGAGGATCAGAATTTGTCATCCATACGTAACTCACCCAGGAATATATCTGATGATGATACAGCAACTGCTAGAAGGCCAGTTCATCGCACCTTACCTGGCTTAATCAATGATATTATGAGCAAAGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCATAACTTGAGGAAGCATAATGGAGAGCGTTATGCATACTCAAGTCACTCTCAGGCTGTTCTTGATTGTTTGCGGAACCGACATGAATGGGCAAGGTTGGTCGATCGGGGTCCAAAGACAAATACTAATAGGAAAAGGCGTAATAAGCATGATGCTGAAGAATCTGATGACGACGGATATGGAAAGGAACGGAATGCGAAAGAGGTAGAAGGGGCGGACATTGAGTTACAAAGAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTAGCTCTTCAGGGAAGAGCAGTAAAGGAGGTCAGGAGTAGACAAAAAACAGACTTGCTAACTGATGAGGATAATGGTCCACTTTCCAATTCTAGTGAAGAGAGTATGTTCAGTGAGGATGAAATTCAGGGTGGCAGAATAGCTCCAGCTGGAAATACTTCAGATGAGGCTGCCAGTACCTAA 3429 0.4304 MKGRSHRPHNTDPPEDWGDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGEDTFACDKCKGKTAAAVSAMHNTEETEVAQLLVELPTKTISMENQNKHNQTAAARVASSRSRLPLKLWNEKPIEDRVHVQGIPGGDPAIFAAQGTPSIFGPQLWKCTGYVPKKFNFQYKEFPFWNNDSDNDNGAGVLFSFSKDTGIVLASPVVALVDMTSEEKTMEAKALKEVDMVGSEDVLNVQNGVSKERAFLRPFVHSSKKKKEELGPSQSKDRSGKQQRVKVAEKEDDPKRRSLHSSKIVFTPASDAKQLESCEERGLKIFKADSRSIKNKNLKDTVVQGRISNCHFVVDTILEEPNNNMTTTEDSLDALHHDTTRHEISVGEALAEEKIGHKAPSLVEMPSMMDNTVTSVLKPDSIENASIKEKGGDFLAVDNADNALAVRSSMSPHMDDLCSSAPELRDNRVSQELNCNPHPISEKCKAKLKREDDDDYCRKHLQFHSSPVNDLKNNEKPSDHISDIGNANVAVVTSLTSHDKKVGVVERVLELVANDHSNEVDALSVDICHEKQEPEGFEGSVEAQKGFSEAKDGSDSASDTSKAETLERPDKMLASPRKSSPTSSTSNSKSLACDLKSEDTENPNPLTKLRVVTDINIHYKNESCPSDALRDGISRKSVKERPKSSLNSNVKGPHASRSVQSSVSKQVTPDVGDSVHCLSSKASLVYQAASIVGSSETHALSNHQKALQVQHKVSFSDQQTVEKPNQTKNHPSSKLNQNHATNPSPLSNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGNLPQLTSTCATSIPMKRTLSVGGKDHHSLVPRRKYKDASRDEPCSSRDHEDGGKRMEKEKVSSSSDQRKQDMSYVENASVKEEGLTSTTAINSTNNVISATSAIAKSSSPSSLEDQNLSSIRNSPRNISDDDTATARRPVHRTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNTNRKRRNKHDAEESDDDGYGKERNAKEVEGADIELQREEFPKGKRKARKRRRLALQGRAVKEVRSRQKTDLLTDEDNGPLSNSSEESMFSEDEIQGGRIAPAGNTSDEAAST 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0588 1142 SUPERFAMILY FYVE/PHD zinc finger 14 70 IPR011011 -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 922 956 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 1023 1072 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 570 642 - -
Lal24g0588 1142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 74 IPR013083 -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 747 787 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 613 630 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 592 611 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 680 704 - -
Lal24g0588 1142 SMART PHD_3 25 68 IPR001965 -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 260 297 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 922 948 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 260 302 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 885 900 - -
Lal24g0588 1142 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 1104 1120 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 819 833 - -
Lal24g0588 1142 PANTHER UNCHARACTERIZED 1 1136 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 1086 1103 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 838 884 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 805 900 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 660 704 - -
Lal24g0588 1142 MobiDBLite consensus disorder prediction 1023 1142 - -
Lal24g0588 1142 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0588 Lal-Chr24 4190602 4204691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0588 24 67 PHD Transcription Factor Family AT5G22260 46.809 2.06e-06 50.1