Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0586 ATGAAAGGCCGATCTCACCGCCCTCATAACACCGACCCACCCGAAGATTGGGGCGACGGTTCTTGGACGGTGGACTGCATCTGCGGTGTCACCTTCGACGACGGCGAGGAGATGGTTAAGTGCGATGAGTGCGGCGTCTGGGTCCACACGCGCTGCTCTCGCTACGTCAAAGGCGAGGACACTTTTGCGTGCGACAAATGCAAGGGAAAGACTGCGGCTGCCGCCTCCGCCATGCACAACACCGAGGAAACCGAGGTGGCTCAGTTGTTAGTTGAGCTTCCTACAAAGACAATCTCAATGGAGAATCAAAACAAACATAATCAAATTGCGGCTGCGAGGGTTGCTTCTTCTCGATCGCGGCTACCGTTGAAGCTTTGGAATGAGAAACCTATTGAGGATAGGGTTCATGTTCAGGGGATACCAGGTGGTGATCCTGCATTTTTCGCTGCGCAGGGAACACCTTCGATTTTTGGTCCTCAGTTATGGAAATGCACTGGTTATGTTCCGAAGAAGTTTAATTTTCAGTATAAGGAGTTTCCTTTTTGGAATAACGATAGTGATAATGATAATGGGGCTGGAGTTTTATTCTCTTTTTCGAAAGATACTGGTACTGTTTTGGCATCACCAGTTGCGGCTTTGGTTGATATGACATCTGAGGAGAAGACAATGGAGGCCAAGGCTTTGAAGGAGATGGATATGGTTGTGAGTGAAGATGTGTTGAATGTGCAAAATGGCGTCACTAAGGAGAGGGCTTTTCTGAGGCCTTTTCTTGTTCATTGCAGCAAAAAAAAGAAAGAAGAATTGGGCCCTTCCCAATCCAAAGATCGGAGTGGGAAGCAACAGCGGGTGAAGGTCGCTGAGAAAGAGGATGATCCCAAGAGGAGAAGTTTCCATTCTTCTAAAACAGAATTTACGCCTGCCAGTGATGCAAAACAATTGGAATCTTGTGAAGAAAGAGGCCTGAAGATTTTAAAGGCTGACACTCGGAGTATAAAGAATAAAAATGTAAAAGACGCAGTGGTTCAGGAACATATTTCCAATAACCATTTTGTTATGGATACCATCACGGAGGAGCCAAATAACAACATGGCAACTACTGAGGGCTCTTCAGATGCATTACATCCCGACACACCAAGACATGATTTTTCTGTTGGAGATGCCTTAACAGAAGAGAAGACTGGCCATAAAACTCCTAGTTTGGTTGAGATGCCTTCTATGATGGACGACACTATTACATCAGTTTTAAAGCCTGATAGCGTTGGAAATGCTTCAATTAAAGAAAAGGGCGGAGATTTCTTGGTAGTAGATAATGCAGATAATGCTTTAGCTGTAAGAAGCACTATGAGTCTTCACATGGATGATCTTTGTGGTTCTGCACCAGAACTTAGGGATAACCGAGTTTCTCAAGAACTTGACTGCAATCTGCGTTCCACCTCTGCAAAATGCAAGGTCAAGTTGAAGAATGAAGATGATGATGATATCTGTAGGAAGCGTCCAAAATTTCATTTTTCTCCAGTCAATGATCTTAAAAATAATGAAAAATCATCTGGTCACATATCTGATATTGGTAATGCTAATGATGCTGTGGTTACCAGTTTAACATCACATGAACAAAAGGTGGGATTTTTTGAAAGAGTATTAGAGGTAGTCGCCAATGATCATTCCAATAAAGTTGATGCATTGTCTGGTGATGTTTGTCATGAAAAACAAGAACCAGAGGGGTTTGAAGGTTCCGTTACAACACAAAATGGATTTTCAGAAGCAAAAGATGGTCCGGGTTCTGCAAAGGATCCATCAAAAGCTGAAAAAATTGAATGTCCTCATAAATTATTAGCATTTACTAGAAAGGCATCTCCAACTTCGTCGACAACGAACTCCAAATCATTGACTCGTGCCTTAAAATCTAATGATACTGAAATCCCTAATCCTCGTACAAAGCATGCAGTCATGGCTGATTGTAACATTCACTCAAAGAATGAAAGATGTCTGAGTGATGCGTCAAGGGATGGAATTTCAAGGAAGACAGTAAAAGAGCGTCCAAAATCGTCTTTGAATTCTAATGTAAAAGGACAGCATGCAAGCATGACTTTACAAAGTTCAGTATCTAAGCAAGTAACTCCTGATGCAGGAGATTCTATTCACTGTTCATCTTCTAAAGCATCTTTTGTATATCAATCTGCAAGTATTTTAGGCTCAAGTGAAACTAATGCATCATTGAACCATCAAAAGGCTTTGCAAGTGCAGAATAAAATTTCTTTTTCAGACCAACAGAGAGTTGAAAAGCCTAACCAAACAAACGTCCATTCTTCCTCTAAGTTGAACCAGAATCATGCAATGAATCCTTCTCCCTTATCAAATTCTTTGATGCTGAGTGATGAAGAGCTTGCTTTGCTATTGCATCAAGAACTAAATAGTTCACCTCGAGTACCTCGAGTACCCCGAGCACGCCATGCTGCTAACTTGCCACAGTTGACTTCTACTTGTGCTACAAGCATTCCAATGAAGCGAACATCGTCTGTTGGAGGAAAGGATCATTCTTTGGTACCTAGACGAAAATACAAGGATGCATCTAGAGATGGACCTTGCAGTTCTCGTGAACTTGAAGATGAAGGTAAAAGGATAGAGAAGGAGAAGGTTCCATCCTCCTCTGATAGGAGGAAGCAAGACATGACATATGTAGAAGATGCTTCTGTAAAGGAAGAAGGTCTTGCATCTACGTCAGCCATAAACTCTACAAACAATGTTGTTTCTGCCATTGCAAAAAGTAGTTCACCCTCCCCTCCTGAGGACCAGAATTTGTCATCTATACGTAACTCACCCAGCAATATATCCGATGATGATACGGCAACTGGTAGAAGGCCAGTCCATCGCACTTTACCTGGCTTAATCAATGATATTATGAGCAAAGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGTTACCGCACTGGCATAACTTGAGGAAGCATAATGGAGAGCGATATGCATACTCAAGTCACTCTCAGGCTGTACTTGATTGTTTGCGGAACCGACATGAATGGGCAAGGTTGGTCGATCGGGGTCCAAAGACAAATACTAGTAGGAAAAGGCGTAGTAAAAATGATGCGGAAGAATGTAATGATGACAGATATGGTAAGGAACGGACTGCGAAAGAGGTAGAAGGGGCGGACATTGAGTTACAAAGAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTAGCTCTTCAGGGAAGAGCAGTAAAGGAGGTCAGGAGTAGACAAAAAACAGACTTGCTAACTGATGAGGATAATGGTCCACTTTCCAATTCTAGTGAAGAGAGTATGTTCAGTGAGGATGAAATTCAGGGTGGCAGAATAGCTCCAGCTGGAAATACTTCAGATGAGGCTGCCAGTGACTAA 3420 0.4284 MKGRSHRPHNTDPPEDWGDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGEDTFACDKCKGKTAAAASAMHNTEETEVAQLLVELPTKTISMENQNKHNQIAAARVASSRSRLPLKLWNEKPIEDRVHVQGIPGGDPAFFAAQGTPSIFGPQLWKCTGYVPKKFNFQYKEFPFWNNDSDNDNGAGVLFSFSKDTGTVLASPVAALVDMTSEEKTMEAKALKEMDMVVSEDVLNVQNGVTKERAFLRPFLVHCSKKKKEELGPSQSKDRSGKQQRVKVAEKEDDPKRRSFHSSKTEFTPASDAKQLESCEERGLKILKADTRSIKNKNVKDAVVQEHISNNHFVMDTITEEPNNNMATTEGSSDALHPDTPRHDFSVGDALTEEKTGHKTPSLVEMPSMMDDTITSVLKPDSVGNASIKEKGGDFLVVDNADNALAVRSTMSLHMDDLCGSAPELRDNRVSQELDCNLRSTSAKCKVKLKNEDDDDICRKRPKFHFSPVNDLKNNEKSSGHISDIGNANDAVVTSLTSHEQKVGFFERVLEVVANDHSNKVDALSGDVCHEKQEPEGFEGSVTTQNGFSEAKDGPGSAKDPSKAEKIECPHKLLAFTRKASPTSSTTNSKSLTRALKSNDTEIPNPRTKHAVMADCNIHSKNERCLSDASRDGISRKTVKERPKSSLNSNVKGQHASMTLQSSVSKQVTPDAGDSIHCSSSKASFVYQSASILGSSETNASLNHQKALQVQNKISFSDQQRVEKPNQTNVHSSSKLNQNHAMNPSPLSNSLMLSDEELALLLHQELNSSPRVPRVPRARHAANLPQLTSTCATSIPMKRTSSVGGKDHSLVPRRKYKDASRDGPCSSRELEDEGKRIEKEKVPSSSDRRKQDMTYVEDASVKEEGLASTSAINSTNNVVSAIAKSSSPSPPEDQNLSSIRNSPSNISDDDTATGRRPVHRTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNTSRKRRSKNDAEECNDDRYGKERTAKEVEGADIELQREEFPKGKRKARKRRRLALQGRAVKEVRSRQKTDLLTDEDNGPLSNSSEESMFSEDEIQGGRIAPAGNTSDEAASD 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0586 1139 MobiDBLite consensus disorder prediction 845 896 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 1083 1100 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 754 786 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 826 905 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 593 610 - -
Lal24g0586 1139 SMART PHD_3 25 68 IPR001965 -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 1101 1117 - -
Lal24g0586 1139 SUPERFAMILY FYVE/PHD zinc finger 14 70 IPR011011 -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 1083 1139 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 918 956 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 664 680 - -
Lal24g0586 1139 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Lal24g0586 1139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 75 IPR013083 -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 664 699 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 264 300 - -
Lal24g0586 1139 PANTHER UNCHARACTERIZED 1 1133 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 918 948 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 571 647 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 264 312 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 615 639 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 681 699 - -
Lal24g0586 1139 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1133 - -
Lal24g0586 1139 MobiDBLite consensus disorder prediction 1021 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0586 Lal-Chr24 4165896 4176914 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0586 24 67 PHD Transcription Factor Family AT5G22260 46.809 2.11e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0586 - - gmx:100810855 1385.55