Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0579 ATGAGCACCTCCAAGGAGAAACCCACTCTTGGTGGTACGCGGATTAAGACCCGCAAAAGAAACATTGCAGCACCTCTGGACCCTGCATCGTTCTCAGATGCAGTGGTCCAGATTTATTTGGATAATGATGGTGATCTGGAACTTGTTGCTAAGAGCGTTGAATCTATAGACCTTGACTTCTCAAGATATGGTGACACCTTTTTTGAGGCAAGTTGTCTTAACCTCCGGAAATATGTTGTTTTCATTGGGTGTCGAACACAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCTTACTCTGTATTAGAGTGTGAACCAAAGCGTGAAGTCATTTTGCCATATGTAATCTACATACAAAAAGTGTTAAGACGAAGGCCATTTCTCATTAAGAGCCTTGAAAATGTAATGCGACGATTCCTACAGTCCTTGGAGCTTTTTGAGGAAGATGAGAGGAAAAAGTTGGCAATCTTCACTGCACTTGCATTCTCCCAGAAGCTTTCTGGTCTTCCGCCAGAGACTGTGTTTCAGCCACTTCTTAAAGATAATCTTGTGACCAAAGGGCTAGTTCTGTCATTTGTGACCGACTTTTTTAAGGCGTATCTGATTGACAACAGCCTCGATGATCTTATTTCGATTCTGAAACGGGGGAAAGTGGAAGATAATCTTTTAAACTTTCTTCCTCTTGCAAAAAGATCTAATGAGTTTTTCACTGAGCATTTCAACAACGAAGGTTTGTCAACCTTGGTGGAGTATAATGAGAAGAAAATGTTTGAGGTGAAGCTTAAGGAAATGAAATCTGCTTTAACAACACAGATAACAGAGGAGGCTGATATAGCTGATGTCATAGAAACTGTGAAGCAGCAAGTTAAAGATTCTAAATTGCCAGACATTGAGGTTGTGCGGATCTTGTGGGATGTTTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAATTCAGCCCTGCGCCAGGTAAAAACTTGGGCAGAACTGTTGAATACATTCTGCAGCAATGGAAACCTTGAGCTTGAACTGATGTACAAAGTACAGATGCAATGCTATGAGGATGCTAAATTGATGAAGCTGTTCCCTGAGATTATCAGGTCTCTTTATGACCAGGATGTGCTGGCTGAAGATACCATTCTTCACTGGTTCCAAAAAGGATCAAACACCAAGGGCAGGCAAAACTTTGTGAAGGCACTCGAACCGCTTGTCAAATGGCTGGAGGAGGCAGAAGAGGAGGAATAA 1266 0.425 MSTSKEKPTLGGTRIKTRKRNIAAPLDPASFSDAVVQIYLDNDGDLELVAKSVESIDLDFSRYGDTFFEASCLNLRKYVVFIGCRTQPGTTKPDEGERHPYSVLECEPKREVILPYVIYIQKVLRRRPFLIKSLENVMRRFLQSLELFEEDERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVTKGLVLSFVTDFFKAYLIDNSLDDLISILKRGKVEDNLLNFLPLAKRSNEFFTEHFNNEGLSTLVEYNEKKMFEVKLKEMKSALTTQITEEADIADVIETVKQQVKDSKLPDIEVVRILWDVLMDAVQWSGKNQQQNANSALRQVKTWAELLNTFCSNGNLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFQKGSNTKGRQNFVKALEPLVKWLEEAEEEE 421
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0579 421 Pfam eIF4-gamma/eIF5/eIF2-epsilon 348 421 IPR003307 GO:0005515
Lal24g0579 421 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 3 421 - -
Lal24g0579 421 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 421 - -
Lal24g0579 421 CDD W2_eIF5C_like 226 414 IPR043510 -
Lal24g0579 421 Gene3D - 252 421 - -
Lal24g0579 421 SUPERFAMILY ARM repeat 263 418 IPR016024 -
Lal24g0579 421 SMART 542_3 335 420 IPR003307 GO:0005515
Lal24g0579 421 ProSiteProfiles W2 domain profile. 256 421 IPR003307 GO:0005515
Lal24g0579 421 Coils Coil 131 151 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal24g0579 Lal-Chr24 4107702 4113650 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0579 310 417 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 4.09e-09 56.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0579 - - lang:109335928 757.288