Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0569 ATGAATTGCTTACCATGTTTTACATCTCAGAAAAGTAAGAAAAGCAATAGTAAGAGGGAACATGGAACTACACCACCTGAAAACGTTATGGCAAAACCACCAGATGTGAAGAAACCAAGGCCAGATGAACCAAACCAAGGTTTTGACCCTGCAAATATTAGTGCACAAAACTACACTTTTCGTGAGCTAGCAACTGCAACAAAGAATTTCAGGCAGGAATGCCTAATGGGTGAAGAGGGCTTTGGCAAAGTCTACAAGGGGGTCATTCCTTCAACCGGCAAGGCGGTGGCCGTGAAGCAACTCGACCGAAATGGTATGCAAGGTTGCAAGGATTTTCTGGCTGAGGTTTCTGCACTAAGTCTCTTGCACCATGAAAATCTGGTCAATCTCATTGGCTATTGTGCTGATGGGGATCAACGTCTTTTGGTTTATGAATTGATTCAAGCAATTCCTCTAGAAGACCGTCTATTTGGTACTTACCATATTTCCCTTTATAACTTGTGTGTTTCTTTGGCAGAGAAAAAAGACAATGAACCTCCACTAGATTGGTACAGCAGAATGAAAGTAGCATCTGTTGCTGCTAAAGGAGTAGAGTACTTGCATGACAGTGTGAATCCACCAGTTATATATAGGGACTTGAAAGCCTCAAACATTTTAGTGGATGAGAATATGAATGTAAAACTAAGTGATTTTGGAATGGCCAAGTTTGCTGGTGCAGATAACAAAATGACCCCTTCACCTGCAAGAGTTATGGGCACATATGGTCATTGTGCTCCAGAGTATGTAAGAACAGGTCAACTCACCATTAAAGCAGATGTGTACAGTTTTGGAGTTGTCTTGCTAGAGCTTATAACCGGACGCCGAGCAGTCGATACCACAAGACCAAATGATGAGCAAAACCTTGTTGCATGGGCACAACCCTTATTCAGGGACCGAAAAAGGTTTCCAGATATGGCAGATCCTCTACTTAATAAACAGTTCCCAGAAAAGGATCTCAATCAAGTTGTTGCAATAGCAGCAATGTGCTTACAAGAGGAACCAGAAGCTCGTCCTTTGATGAGTGATGTTGTGACTGCTTTGAGCTTTCTTTCCATAGTTCCTCCTGCAGATGCTATTCCACCCTCTATCCCACATGCTACCTCAGTCTCTAAGCATAGTGAAGGTGAAAGTGGAAGTGAAAGTGGAAGTGGAAGTGAAAGCGGAAGCAACTATGAAAGTGGAAGCGAAGCAGAAGCTGGTAAGGAGAGCCGCAGAAGATATAGTTCAAAGAAGGGTTCTTCCAAGTATAAGGGTGGAGCAAGTTCAAAATACCAAGAAAGTGATGTCTCAGATGTTGAAGATACTGCAGGAAGCAAGGAGTTTTACTCCAAATCAAGCCGCAAAAGCAGCACGGAATCGAGGAACGGAATAATCACTTCAGAATCAGAAGATGGAAGTGCTTACTCCAGCAACAAAAGCAATAGGAAATCACACAGAAAATTGAGCCAAAGGAGCAGCAGGGAATCTTCTACAAGAGGGTTAAGCCAAAAGAGTAGCAAAAAAACTCCCAACATAGATTTAAGCCATAAGAGCAGCAGAAAATCTTCCAACAAAGATTTAAGCTCAAAGAGCAGCAGAAAATCTTCTGCCAGAGTTATAAGCCACAAGAGTACTAGTGAGACATCATCTGAGGATGGAAAGATTTCCTTAAGCCGCAATAGTACTAAGAGTAGTGTGGAATCAAATGATGGACCTCATTTGTTTGGGCATGGCAACAGCAAAATATCACAAAGGAACATATCTTTTGGCCTTACAAGCAGTGAAAGTGTTCATTCAGATAACAACAACAGCAAAAGGACAGAAGAGGAATAG 1851 0.4209 MNCLPCFTSQKSKKSNSKREHGTTPPENVMAKPPDVKKPRPDEPNQGFDPANISAQNYTFRELATATKNFRQECLMGEEGFGKVYKGVIPSTGKAVAVKQLDRNGMQGCKDFLAEVSALSLLHHENLVNLIGYCADGDQRLLVYELIQAIPLEDRLFGTYHISLYNLCVSLAEKKDNEPPLDWYSRMKVASVAAKGVEYLHDSVNPPVIYRDLKASNILVDENMNVKLSDFGMAKFAGADNKMTPSPARVMGTYGHCAPEYVRTGQLTIKADVYSFGVVLLELITGRRAVDTTRPNDEQNLVAWAQPLFRDRKRFPDMADPLLNKQFPEKDLNQVVAIAAMCLQEEPEARPLMSDVVTALSFLSIVPPADAIPPSIPHATSVSKHSEGESGSESGSGSESGSNYESGSEAEAGKESRRRYSSKKGSSKYKGGASSKYQESDVSDVEDTAGSKEFYSKSSRKSSTESRNGIITSESEDGSAYSSNKSNRKSHRKLSQRSSRESSTRGLSQKSSKKTPNIDLSHKSSRKSSNKDLSSKSSRKSSARVISHKSTSETSSEDGKISLSRNSTKSSVESNDGPHLFGHGNSKISQRNISFGLTSSESVHSDNNNSKRTEEE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0569 616 MobiDBLite consensus disorder prediction 539 575 - -
Lal24g0569 616 PANTHER RECEPTOR-LIKE KINASE LIP1 1 570 - -
Lal24g0569 616 MobiDBLite consensus disorder prediction 1 52 - -
Lal24g0569 616 MobiDBLite consensus disorder prediction 461 485 - -
Lal24g0569 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lal24g0569 616 MobiDBLite consensus disorder prediction 516 538 - -
Lal24g0569 616 Pfam Protein tyrosine and serine/threonine kinase 75 360 IPR001245 GO:0004672|GO:0006468
Lal24g0569 616 PANTHER OS07G0668900 PROTEIN 1 570 - -
Lal24g0569 616 MobiDBLite consensus disorder prediction 500 515 - -
Lal24g0569 616 ProSiteProfiles Protein kinase domain profile. 70 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0569 616 SMART serkin_6 70 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0569 616 Gene3D Transferase(Phosphotransferase) domain 1 165 364 - -
Lal24g0569 616 SUPERFAMILY Protein kinase-like (PK-like) 60 379 IPR011009 -
Lal24g0569 616 MobiDBLite consensus disorder prediction 440 460 - -
Lal24g0569 616 MobiDBLite consensus disorder prediction 585 606 - -
Lal24g0569 616 MobiDBLite consensus disorder prediction 373 616 - -
Lal24g0569 616 MobiDBLite consensus disorder prediction 379 409 - -
Lal24g0569 616 Gene3D Phosphorylase Kinase; domain 1 54 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0569 Lal-Chr24 4035074 4039015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0569 1 378 Glycoside Hydrolase AT3G07070 58.398 3.27e-151 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal24g0569 Pkinase 5.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0569 - - lang:109335196 739.184