Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0564 ATGGAAGGCAATGACAACAACAACAACACCAATAACAACAACAACAACCTCAGCTCCTATTTCCACCACTTCAACCACCAGCCTCCGCCGCCGAATGGGGTGGTGCCACCAACCAGTGATGGGTCCCAGTCTCATATGTTATACCCTCACACCACCACCACAACAACAACAACAACTACTGTTGTTCCTTCTGTAGTGTCCTCTCAGTCCCAATTACAAAAGAAGAAACGAGGTAGACCTAGAAAATACTCTTCTCCAGAACAAGCTCTCGCTGCTAGAAAAGCCGCTACGACGTCGTCTTCTCCTTCTCCTTCTCTTTCTTCTTCCAAAAAATCAACTCAATCCTTCTCTCTAGGCACTGCAGGACATGATTTCACTCCACATTTCATTAATGTTCTTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTGTTCATGCAACAAAACAAGTGTGAGATCTGCATTCTTTCTGCATCTGGTTTCATCTCTAATGCCTCTCTTAGTCAGCCAGCAACCTCAGGAGGCAGTATTACATATGAGGGACGGTTTGAGATTGTTTCACTGAATGGTTCCTATATCCGTAATGAAGTTGGAAGTCGATCTGGTGGTCTCAGTGTATGCTTGTCTAATACTGACGGGCAAATCATAGGTGGTGGCGTTGGTGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATCGTTGGTGCATTCATTATTGACCCCAAGAAGGATGCTAGTGCTGGAATTAAAGGTGATGTTTCTTCCAGCAAGTTGCCACCACCGGTAGGTGATCCAGTCTCAAGTTTTGGTTTCGGCCGAGCCGCCGACTCTTCTATTGGGAATCCAATCAGGGGAAATGAGGAGCATCAAACTATTGGAGGAAGTCATTTCAATATTCAACAAGGTGGCATGCCAGGGACACATTCCCGTCCCTCTGACTGGGGAGGTCATCCGGATTCAAGAAATGCCGACTTTGAACTGACAGGAAGAACTGGTCATGGAGCACATCAATCACCTGATGAAAATGGGTACTATGAGTAG 1041 0.4621 MEGNDNNNNTNNNNNNLSSYFHHFNHQPPPPNGVVPPTSDGSQSHMLYPHTTTTTTTTTTVVPSVVSSQSQLQKKKRGRPRKYSSPEQALAARKAATTSSSPSPSLSSSKKSTQSFSLGTAGHDFTPHFINVLAGEDVGQKIMLFMQQNKCEICILSASGFISNASLSQPATSGGSITYEGRFEIVSLNGSYIRNEVGSRSGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGAFIIDPKKDASAGIKGDVSSSKLPPPVGDPVSSFGFGRAADSSIGNPIRGNEEHQTIGGSHFNIQQGGMPGTHSRPSDWGGHPDSRNADFELTGRTGHGAHQSPDENGYYE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0564 346 MobiDBLite consensus disorder prediction 1 25 - -
Lal24g0564 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 340 IPR039605 GO:0003680
Lal24g0564 346 MobiDBLite consensus disorder prediction 37 73 - -
Lal24g0564 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 238 - -
Lal24g0564 346 MobiDBLite consensus disorder prediction 275 346 - -
Lal24g0564 346 CDD DUF296 126 237 IPR005175 -
Lal24g0564 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 237 IPR005175 -
Lal24g0564 346 MobiDBLite consensus disorder prediction 291 307 - -
Lal24g0564 346 Gene3D - 127 252 - -
Lal24g0564 346 ProSiteProfiles PPC domain profile profile. 119 261 IPR005175 -
Lal24g0564 346 MobiDBLite consensus disorder prediction 91 118 - -
Lal24g0564 346 MobiDBLite consensus disorder prediction 1 118 - -
Lal24g0564 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0564 Lal-Chr24 3995255 3999495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0564 40 346 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 47.214 1.30e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0564 - - lang:109345383 462.225