Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0552 ATGGGGACTCCGGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGACCCAGAGGTATCTTGGATTGATGGACAGGTATCAAAGATCAATGGAAAGGATGCGGAAATTGAAACTACCGATGGGAAAAAGGTTGTTGCAAATTTATCAAAAATACTTCCCAAAGATATGGAAGCCCCTCCTGGTGGAGTGGATGATATGACTAAGCTGTCCTATTTGCACGAACCAGGAGTCCTTCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGTGCCCACATGATGCAACAATACAAGGGAGCACCATTCGGAGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCTATGGTTAATGAAGGAAAAAATAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTCATGCAATACCTTGCTTTCTTAGGTGGTAGGGCTGCAACTGAAGGACGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAGTTTGATAAGAGTGGAAGAATCTCAGGAGCAGCAATCCGAACTTACCTTCTAGAGAGATCTCGGGTTTGCCAAATTAATGATCCTGAGCGAAACTACCACTGCTTTTACCTTCTTTGTAATGCACCGCAGGAGGAAGTTGAGAAATACAAATTAGGAAATCCTAGATCATTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGATATAAGTGATGCCCGTGAGTATCTTGCCACTCGGAGAGCAATGGATATTGTTGGAATAAGCCAAAAGGATCAGGAAGCCATTTTCAGAGTTGTTGCTGCAATTCTTCATATTGGTAATATTGAATTTTGCAAAGGAAAGGATGTTGACTCATCAATTCCAAAAGATGACAACGCCAAATTCCACCTAAAAACAACTGCTGACCTTCTCATGTGTGATGCTGATGCCTTGGAAGACGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAGCGGAGCCTTGATCCCCAAAGTGCAGCAGTGAGTAGAGATGGATTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAACAGTTCAATTGGACAAGACCCCAATTCTAAATGTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATTCAACAGTTTTGAGCAGTTTTCCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAAGTCTCAGACCACATTACACACTTCCAGTTTGCTTATAGCTGTTTTCTCTCACGTGTTTAAAATGGAACAAGAAGAATATACGAAAGAGCAGATCGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATCATTGCACTCCTCGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTCGCAAACAAGCTTTATCAAACATTTAAAAGCCACAAGCGCTTCATTAAGCCAAAATTGTCTCGAACAGATTTCACTGTTGCTCATTATGCTGGGGAGGTGACATACCAGTCTGACCAATTTTTAGACAAAAATAAGGATTATGTGGTTCCTGAACATCAAGATTTATTAGGTGCTTCCAAATGTTCTTTTGTAGCTGGCCTTTTCCCACCACTTCCGGAAGAGTCATCAAAATCTTCCAAATTTTCTTCAATTGGATCTCGTTTTAAGTTACAACTACAACAGCTAATGGAAACATTAAATTCTACAGAACCCCATTACATTAGATGCGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATATGAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATTAGTTGTGCTGGCTACCCCACTCGTCGTCCTTTCTTTGAATTTGTAAACAGATTTGGCCTCCTTGCCTCTGAGGCCATGGAAACAAACTATGATGAAAAGACTGTTTGCAAGAAGATTCTGGATAAAATGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTGGATGCACGGAGAGCTCAAATACTTAGTAATGCAGCAAAATCTATTCAACGGCGTATACGAACCCATCAAGCTCGTAGACATTATCTTGCATTGCGAAAGAAGACTATATACGTGCAGTCTCGTTGGAGAGGAAGGCTTGCTTGTAAACTCTATGACGGCTTAAGAAAGGAGGCTGCTGCTAAGAAAATTCAAAAGAATGTACGCAGATATGAAGCTAGGAAAGCGTATAAAGAACTTCATGTGGCAGCACTTGCATTGCAAACAGCTTTAAGAGCAATTGCTGCTCGGAAGGAGTTCAGATTTAAGAAGCAGACTAAGGCTTCCATCATTATTCAGGCTCGATGGCGAAGCCACAATGCTGCTTTATATTATAAGAGGCTCAAGAGGGGTACAATAGTTACACAATGCAGATGGAGGGGGCGCATGGCCAGGAGAGACCTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGCGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAGGGTTTAAGGACCAATGTGGAAGAATCCAAAGCCCAAGAGATAGCAAAATTGCAGAACTCATTACAGGAGATGCAGAGCAAACTTGATGAAACCAATGCTTTGCTCGTCAGGGAGCGAGAGAATGCAAAGAAAGTTATCGAAGAAGCACCTCCTGTTGTTAAAGAAACTCAGGTTGTTGTTGAAGATACGCAGAAGATTGAAGCACTAACAGTGGAAATTGAGAGCCTAAAGATTTCATTCGAGTCAGAGAAGCAGAAAGCTGATGACTTTGAAAGAAAATATAATGAAGCTCAAGTTTGTAGCGAAGAAAGGGGTAAAAAAATAGAGGACTTGGAGAAGAAGGTCCGTCAGCTCCAAGAATCATTGACTAGGCTAGAAGAGAAGAATAATAATATAGAATCGGAGAATCAGGTCCTACGTCAACAAGCTGTATCCATGGCAGCTGCACCTGCTAAGGTCCTTTCAGGAAGGTCCAGATCAATTATCCAGAGAGGCGCTGAAAGTGGTCATATTCCAGTGGAAGCGAAGACACCTTCGACTAATCAGGAACTGCATCAAAGCCCATCAATGAGCCAGAGGGAATCCTCAGAAGTGGATGATAAACCCCAAAGGTCACTAAATGAGAAACAACAGGAGAATCAAGAGTTACTCATTAGATGTATTGCGCAACATCTAGGCTTTGCTGGGAACAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACCAGCGTTTTTGATCGTATCATCCAAACTATCGGTCATGCAATTGAGACTCAGGATAACAATGACATCTTGGCTTATTGGTTATCCAATGCCTCAACACTTCTCTTGTTACTCCAGCGCACACTCAAGGCAAGTGGAGCTGCTGGGATGGCTCCACAACGCCACCGTCGTTCTTCATCAGCAACTCTATTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAACAGGAGTCAATCTTTCCCTAATTAATGGTAGCTCAAGCAGAGGGGTAGAGACATTAAGACAAGTTGAAGCCAAATACCCAGCTCTTCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAAATATATGGAATGATACGTGATAACTTGAAGAAAGAAATCTCTCCTCTGCTTGGTTTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCCTGGTTAAGGGATCATCACGTTCTGTCGCAAACACTGAAGCCCAGCGCACTTTGATTGCACACTGGCAGGGGATAGTTAAGAGCCTAGGGAACTTCTTAAATACTTTGAAAGAAAATCATGTCCCACCATTTTTGGTTCGCAAGGTTTTCACACAAATTTTTTCTTTCATCAATGTACAATTATTCAATAGTCTTCTATTAAGACGAGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAGGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAAGCAACAGATGAGTATGCTGGTTCAGCTTGGGATGAGCTCAAACATATTAGACAGGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACTCTGGATGAAATAAGTCATGATCTATGCCCAGTCCTTAGTATACAGCAGCTATATCGGATTAGCACCATGTACTGGGATGACAAGTATGGCACGCATAGTGTCTCCCCTGATGTCATTTCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACATATCAAAGTCGATGGAACAGATGGATATCGCTGACATAGATCCCCCGCCACTAATTCGTGAAAACTCGGGCTTTAGCTTTTTGTTGCCACGCCCAGATTGA 4668 0.4107 MGTPVNIIVGSHVWIEDPEVSWIDGQVSKINGKDAEIETTDGKKVVANLSKILPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMVNEGKNNSILVSGESGAGKTETTKMLMQYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCNAPQEEVEKYKLGNPRSFHYLNQSKCYELADISDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHIGNIEFCKGKDVDSSIPKDDNAKFHLKTTADLLMCDADALEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKCLIGVLDIYGFESFKFNSFEQFSINFTNEKLQQHFNQAKSQTTLHTSSLLIAVFSHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKSHKRFIKPKLSRTDFTVAHYAGEVTYQSDQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENMNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFVNRFGLLASEAMETNYDEKTVCKKILDKMGLKGYQIGKTKVFLRAGQMAELDARRAQILSNAAKSIQRRIRTHQARRHYLALRKKTIYVQSRWRGRLACKLYDGLRKEAAAKKIQKNVRRYEARKAYKELHVAALALQTALRAIAARKEFRFKKQTKASIIIQARWRSHNAALYYKRLKRGTIVTQCRWRGRMARRDLRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNVEESKAQEIAKLQNSLQEMQSKLDETNALLVRERENAKKVIEEAPPVVKETQVVVEDTQKIEALTVEIESLKISFESEKQKADDFERKYNEAQVCSEERGKKIEDLEKKVRQLQESLTRLEEKNNNIESENQVLRQQAVSMAAAPAKVLSGRSRSIIQRGAESGHIPVEAKTPSTNQELHQSPSMSQRESSEVDDKPQRSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRHRRSSSATLFGRMTQSFRGTPTGVNLSLINGSSSRGVETLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRTLIAHWQGIVKSLGNFLNTLKENHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQMDIADIDPPPLIRENSGFSFLLPRPD 1555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0552 1555 SMART DIL_2 1373 1480 IPR002710 -
Lal24g0552 1555 Gene3D - 685 748 - -
Lal24g0552 1555 ProSiteProfiles IQ motif profile. 824 853 IPR000048 GO:0005515
Lal24g0552 1555 ProSiteProfiles IQ motif profile. 776 805 IPR000048 GO:0005515
Lal24g0552 1555 SMART MYSc_2a 57 751 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 ProSiteProfiles Dilute domain profile. 1184 1498 IPR002710 -
Lal24g0552 1555 ProSiteProfiles IQ motif profile. 753 780 IPR000048 GO:0005515
Lal24g0552 1555 Coils Coil 895 922 - -
Lal24g0552 1555 SMART iq_5 800 822 IPR000048 GO:0005515
Lal24g0552 1555 SMART iq_5 823 845 IPR000048 GO:0005515
Lal24g0552 1555 SMART iq_5 752 774 IPR000048 GO:0005515
Lal24g0552 1555 SMART iq_5 871 893 IPR000048 GO:0005515
Lal24g0552 1555 SMART iq_5 775 797 IPR000048 GO:0005515
Lal24g0552 1555 SMART iq_5 848 870 IPR000048 GO:0005515
Lal24g0552 1555 MobiDBLite consensus disorder prediction 1121 1135 - -
Lal24g0552 1555 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 Pfam Myosin head (motor domain) 64 738 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 Gene3D - 803 850 - -
Lal24g0552 1555 Gene3D - 851 900 - -
Lal24g0552 1555 Gene3D - 752 802 - -
Lal24g0552 1555 ProSiteProfiles Myosin motor domain profile. 62 750 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 PANTHER MYOSIN 6 1552 - -
Lal24g0552 1555 PANTHER MYOSIN-9 6 1552 - -
Lal24g0552 1555 Coils Coil 993 1020 - -
Lal24g0552 1555 MobiDBLite consensus disorder prediction 1092 1136 - -
Lal24g0552 1555 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 PRINTS Myosin heavy chain signature 500 528 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal24g0552 1555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 802 901 IPR027417 -
Lal24g0552 1555 Coils Coil 1028 1069 - -
Lal24g0552 1555 CDD MYSc_Myo11 76 738 IPR036018 -
Lal24g0552 1555 Coils Coil 934 975 - -
Lal24g0552 1555 Gene3D - 252 310 - -
Lal24g0552 1555 Gene3D - 439 641 - -
Lal24g0552 1555 ProSiteProfiles IQ motif profile. 801 830 IPR000048 GO:0005515
Lal24g0552 1555 MobiDBLite consensus disorder prediction 1101 1120 - -
Lal24g0552 1555 Pfam IQ calmodulin-binding motif 803 822 IPR000048 GO:0005515
Lal24g0552 1555 Pfam IQ calmodulin-binding motif 874 893 IPR000048 GO:0005515
Lal24g0552 1555 Pfam IQ calmodulin-binding motif 755 773 IPR000048 GO:0005515
Lal24g0552 1555 Pfam IQ calmodulin-binding motif 850 870 IPR000048 GO:0005515
Lal24g0552 1555 Gene3D Myosin VI head, motor domain, U50 subdomain 312 619 - -
Lal24g0552 1555 ProSiteProfiles IQ motif profile. 872 901 IPR000048 GO:0005515
Lal24g0552 1555 CDD MyosinXI_CBD 1135 1521 IPR037975 GO:0007015
Lal24g0552 1555 Pfam DIL domain 1374 1477 IPR002710 -
Lal24g0552 1555 ProSiteProfiles IQ motif profile. 849 876 IPR000048 GO:0005515
Lal24g0552 1555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 803 IPR027417 -
Lal24g0552 1555 Gene3D Kinesin motor domain 65 680 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0552 Lal-Chr24 3887893 3902777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0552 1 1555 Myosins gene family AT1G54560 82.379 0.0 2678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0552 K10357 - gmx:100816792 2754.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0552 24 3887893 3902777 Lal24g0552 24 3887893 3902777 ECH