Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0544 ATGCATGACCCCAATGCCCTTATATCTCTTATTTGCACCCTTGTTTTGTTGAATGCCCTTCATGCATCATGCAAGGACTCAGATCCTTTGATCTTAGGGTGTGGATTAGGTGAAGGTGGTGGCAAAGATGGTGATGGAAGACAATGGTTACCTGATAACAAATATGTTTCAGGAGGCAATTCTATCACATCAAAAGCCTCATTCCAAGACCCTTCACTTTTATCTGAGGTTCCATATATGACAGCAAGAATTTTCACATTGGAAGCAACTTACAAATTCCCTGTTCAAATGGATAAGCGTTATTGGCTAAGGCTCCATTTCTATCCTTCTGTTTATGACAGTTACAATCCTTCCAATTCATATTTCTCTGTCACTGCAAATGGTGTTACCCTGCTCAGCAATTTCAGCGCCTCGATTACTTGCCAGGCGCTCTCGCAGGCTTACCTTGATAGGGAGTACTCACTCGCGCCTTTGAATTCGGATACTCTAACCCTTGTTTTTAAGCCTTCTGATAAGCACAATGGAGCTTTTGCTTTTGTCAATGGGATTCAGTTGATCCAAATGCCTGAGATATTTGATTCTGCTTCGCTGGTGGGGTATGGTGACCAAACCGTGGACGCGAAAAGTTTACATTTTCAAACAATGTTTAGATTAAATGTTGGTGGGCAATACATATCTCCAAATCAAGATTCTGGTCTAAGCAGAATGTGGTATGATGATACACCTTATATTTATGGTGCAGCCACTGGTGTTACCAATCAAGCTGCCAAGGATGTTAAAATCGATTACCAATCAATGCCTCAGGACATTGCTCCTTCTAGCGTCTACTCAACTTCAAGATCGATGGGCAATAATAAGGATATCAACATGGGGTACAATCTCACATGGATTTTTCAAGTTGATCCAAATTCAATGTACCTTACAAGATTGCATTTCTGTGATTACTATTACTCCAAAGTGAATGAGATTGTTTTCGATATATTTGTCAACAATCAAACGGCGCAGGCTCAAGCTGATGTGATTGGGTGGACAGGAGGTAAAGGAGTTCCAACTTACAAGGACTATGTGGTATATGTGCAAGATAGTGCAGGTGAAGATCAACTATGGCTTGCTTTGCACCCAGCACCTGATACAAAGCCGGAGTTTTATGATGCCTTACTCAACGGGGTAGAGATATTTAAGCTAAATGATACAAACTTGTCTGGACCAAATCCTCAGCCTTCTGATATGATGGTTGAACATGAGGTGAAGGAAAGAAAATTCGAAGACAAAGACACACATTATAGTAAGACTTTTGTTATTGGTGGAGCTGCTGGAAGTGTTGTAGGTGTTGCCTTAGTTGCTGCAATTTGCATTGTTGTCCACAAAAGGAAGAAGAGGTCTCCTGGATCATACTCACACAACTCGAGTTGGCTTCCTCTCTATGGGAACACGCACACGAGTGGAAACTCCAAATCGACAATTTCTGGCAAGAGTACTGTTGGTAGCACAAACTTATCAGCCATGGCTCAAGGACTATGCCGCTATTTCTCGTTACAAGAGATGAAGCAAGCAACGAAGAATTTCGACGAGTCCAACGTTATTGGTGTTGGAGGGTTTGGAAAGGTTTACAAGGGTGTTATTGATAATGGCTTTAAAGTTGCAGTCAAAAGATCTAATCCACAATCAGAACAAGGAGTCAATGAATTCCAGACTGAGATTGAGATGCTTTCTAAACTTAGACACAAGCATTTGGTGTCATTGATTGGGTTTTGTGAGGAAAGTGAAGAGATGTGCTTAGTTTATGACTTCATGGCACTTGGTACCATGAGAGAACATCTTTACAAGGGAAACAAACCAACAACTACTCTATCATGGAAGCAAAGGTTGGAGATATGTATTGGAGCAGCAAGAGGCCTTCACTACCTTCACACTGGGGCAAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCCTCGACGAAAACTTCGTTGCCAAGGTTTCTGATTTCGGATTGTCAAAAACTGGTCCAAACATGAACCAAGGTCATGTTAGCACTGTGGTTAAGGGTAGTTTTGGATACTTGGATCCTGAATATTTCAGGAGGCAACAATTGACTGAAAAATCTGATGTGTACTCATTTGGGGTTGTCCTGTTTGAAGCTCTTTGTGCAAGGCCTGTTCTGAATCCTAGCCTTCCAAAGGAACAAGTGAGCCTAGCTGAATGGGCTTTATCATGCAAAAGAAAAGGGACATTGGAGGATATTATTGACCCTAGTCTCAAAGGAAAGATCAACCCTGAAAGCTTGAAGAAGTTTATAGATACAGCTGAGAAATGTTTGTCTGATCACGGACTCGATCGACCCTCGATGAATGATCTGTGTTGGAATCTAGAATTTGCTCTCAACCTGCAAGAGAACCCTGATGGTTCACCTCCCTCTTCATCACATGTTGTTGAATGTGATCTTGAAGAAGTAAGCTTGAAAGACCATAACAACAATGAAATGGCAGCACATTATAAGAACCTGAGCCTCGGAAGCGACCATGATAATAGCGAAGAATCCGGTGAGAATTCGACTGAGATCTTCTCACAAATTGTGAATCCAAAAGGGAGATAA 2607 0.4147 MHDPNALISLICTLVLLNALHASCKDSDPLILGCGLGEGGGKDGDGRQWLPDNKYVSGGNSITSKASFQDPSLLSEVPYMTARIFTLEATYKFPVQMDKRYWLRLHFYPSVYDSYNPSNSYFSVTANGVTLLSNFSASITCQALSQAYLDREYSLAPLNSDTLTLVFKPSDKHNGAFAFVNGIQLIQMPEIFDSASLVGYGDQTVDAKSLHFQTMFRLNVGGQYISPNQDSGLSRMWYDDTPYIYGAATGVTNQAAKDVKIDYQSMPQDIAPSSVYSTSRSMGNNKDINMGYNLTWIFQVDPNSMYLTRLHFCDYYYSKVNEIVFDIFVNNQTAQAQADVIGWTGGKGVPTYKDYVVYVQDSAGEDQLWLALHPAPDTKPEFYDALLNGVEIFKLNDTNLSGPNPQPSDMMVEHEVKERKFEDKDTHYSKTFVIGGAAGSVVGVALVAAICIVVHKRKKRSPGSYSHNSSWLPLYGNTHTSGNSKSTISGKSTVGSTNLSAMAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAVKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEESEEMCLVYDFMALGTMREHLYKGNKPTTTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPSLPKEQVSLAEWALSCKRKGTLEDIIDPSLKGKINPESLKKFIDTAEKCLSDHGLDRPSMNDLCWNLEFALNLQENPDGSPPSSSHVVECDLEEVSLKDHNNNEMAAHYKNLSLGSDHDNSEESGENSTEIFSQIVNPKGR 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0544 868 SUPERFAMILY Protein kinase-like (PK-like) 498 797 IPR011009 -
Lal24g0544 868 Gene3D Transferase(Phosphotransferase) domain 1 598 807 - -
Lal24g0544 868 Pfam Malectin-like domain 33 394 IPR024788 -
Lal24g0544 868 MobiDBLite consensus disorder prediction 840 868 - -
Lal24g0544 868 PANTHER OS07G0166700 PROTEIN 19 854 IPR045272 GO:0004714|GO:0006468
Lal24g0544 868 SMART serkin_6 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0544 868 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Lal24g0544 868 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 854 - -
Lal24g0544 868 Pfam Protein tyrosine and serine/threonine kinase 526 790 IPR001245 GO:0004672|GO:0006468
Lal24g0544 868 Gene3D Phosphorylase Kinase; domain 1 483 597 - -
Lal24g0544 868 Gene3D - 34 189 - -
Lal24g0544 868 Gene3D - 210 396 - -
Lal24g0544 868 CDD STKc_IRAK 528 790 - -
Lal24g0544 868 ProSiteProfiles Protein kinase domain profile. 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0544 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0544 Lal-Chr24 3833963 3836569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0544 11 868 Receptor kinase-like Gene Family AT3G51550 53.073 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal24g0544 Malectin_like 6.5e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0544 - - gmx:100791236 1380.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0710 13 4612978 4615488 Lal24g0544 24 3833963 3836569 LSH
Lal3g1581 3 21539365 21541905 Lal24g0544 24 3833963 3836569 PCT
Lal18g0229 18 1907078 1909693 Lal24g0544 24 3833963 3836569 PCT
Lal24g0544 24 3833963 3836569 Lal3g1581 3 21539365 21541905 PCT
Lal24g0544 24 3833963 3836569 Lal18g0229 18 1907078 1909693 PCT