Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0529 ATGGAGCAGCTAATGTTGAAGCAAAGGATGTTGGATAGGAAACGTAGAGAAGCATTGAGTAAGATATTTATCATCAAAGGAAGCGTTACAGTATTTTGTAGAATTCGACCATTTGTGTTGGCAGAGAAGAAGAAAATTTCTGAACCTGTTTCAGCTGGATCAGAGAGGGTTCGGGTTAAGTATGGAGGAACAATGAAATATTTTGAGTTTGATAAGGTTTTCACTGAAGAAGCAAACCAAGAAAGTGTTTTTGTTGAGATTGAGCCAATTCTCAGATCTGTAATGAATGGCCACAATGTGTGTGTTTTTGCTTATGGTCAAACTGGCACAGGCAAGACATTCACAATGGATGGCACAAATGAGCATCCTGGAATTATTCCCCGAACACTTGAACACCTTTTTCATCAAGCCTGCACGGATAATTCATCATATACATTTTCAATGAGCATGTTGGAAGTTTACATGGGAAATCTCAGGGATCTATTAGCACCAAGACAAAAGTGTAGAGCATATGAACCTATGAAAAAGTGCAATCTGAACATACAAACAGATCCAAAAGGGTTGATTGAAATTGAGGGACTCACAGAAGTGAAAGTATCAGATTATGCTATAGCTAAATGGTGGTACAACAAGGGTAGACGGTTCCGATCAACATCAGGGACTAATGTCAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAAACATTTTTCGACATGGGGATGCTTCGGAAGCGAAAAGCCAATTAAGTAGATTGTGGATGGTTGATCTTGGAGGCAGTGAACGGTTGCTTAAAACCGGAGCCAAAGGACTAACACTGGATGAAGGCCGAGCCATTAATCTTTCTCTTTCAGCATTAGCTGATGTTATTGCAGCTTTGAAAAGAAGGAAAAATAGCAAGCTCACTCAAATACTGAAGGATTCTCTTGGTGATGGATCAAAGGCCTTGATGCTGGTGCATATAAAGCCTTCTGAGGAAGATGTCTGTGAGACAATTTCTTCTTTGAACTTTGCAAAGAGGACAAGAGCAATAATGTCAAATAAAGAAGTATCAATGGAACTGAAGAAGCAAAGGGAGAAACAGATTACAGAACTTGAGGAAGAGGTTAAGGAAACTGAAAAGCAAATTCAGAATATAAAGGATGAAATAAAGAATGCTGAGTTCAACTTAATCAACAATAAAAAGCTCTTCTCAACCACACAGAATGTTACAGAGAATGATGAAGTTGAGACATGTATTAATCCAAAAGATGATGTAGAAAACATCATTGAAACTGGTAAAGAATGTAAGAAGTATATGAAAAGCAATGTATCTAATTCAGGGCCTCGATTCATGAGTCCAACAGTTGCTAGTCGCCAAAGGAAAAATGCTGTAGAACGTGATAGTATAAGCCTGAGATCAAAAACTATTAGATCAATTGTTACAAGAAGTTCAGTCCAGTTTTCATGTTCTCAAACATTAAGTTATTCAGATATTCATGTTAAAGCGTTGCTGCAAAGTTCAAAAGGAAAATCTGGACACACTGAAGCTGAAGCAAATACTACTGTTCTCACAGAAAGGACTAATGCATTGAATTTGAAAGAAATCATCATGAGTAAGACGCAGCAACAGAGGCCTGAGGAAAAAGAAGCAATAAAGTATGGAGATGTGTTTGGAGTGAAGGGAGATATAGCAAGCAATGTGGTGGCGCCTAAAGATGCTGCCATGATGCAGAAGGCGGAAAATGATATGATCGGAAAGACCAAAAGGGGTGGCGCCGCCGCGGCCATGCAGTCTGCTGCCATGAAAAATGAGAAAAGTGGTGTAGTGGGACATAATGATACGAGTAAAATTGTTGGCGATGGAGGAGTCAACTTAAGTGAGAGCAATGATACGGGGAACCGTGTCATATCAGAGAGTGTTGCAGGACAGGTTCTTCACAAAGTAGAAGAAAATGACAAGGAAAGGAAAATTTGTAAATTAGCCGAGGTTGTGGAGCAATATAGCCAAAAGGTTCCAGTGAGAAGTAGTATGGCACCATCTTCCATTGCTGAAGAGGTGGGAATTGGAGATGGTGGGAACGTTGGAATCACGATAGGTGAAGCCCTGGAAGCCACTGCATTAACGGCTGGAAAGAAGCCAGTGGAGTGGAGTGATGCAGCTGCTATTCAAGCAGCTGAAGTTAGAGCCACCGGAAGGACCAACATTGTCCCCGGAGGTGTTGCCGCCGCGGCACAATCAGCCGCTACCCTCAATTCTAGACTAACAAAACATGACGAGAAGACCAAACTCCGAGATATTCTCGCGGATGCAACTTCGAAGCTACCTTCAGATAGAGCAGCGACAAGGAGAGATGCTGAAGGTGTGGTGAGTGCAGAGCTAAGAAATGATCCTTACCTCACTACTCACCCTGCTGCCGCCGCCGCATCCGTCGCCGCCGCCGCTAGGCTAAATCAAAACAATCATAACTAA 2457 0.4176 MEQLMLKQRMLDRKRREALSKIFIIKGSVTVFCRIRPFVLAEKKKISEPVSAGSERVRVKYGGTMKYFEFDKVFTEEANQESVFVEIEPILRSVMNGHNVCVFAYGQTGTGKTFTMDGTNEHPGIIPRTLEHLFHQACTDNSSYTFSMSMLEVYMGNLRDLLAPRQKCRAYEPMKKCNLNIQTDPKGLIEIEGLTEVKVSDYAIAKWWYNKGRRFRSTSGTNVNEASSRSHCLTRINIFRHGDASEAKSQLSRLWMVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVIAALKRRKNSKLTQILKDSLGDGSKALMLVHIKPSEEDVCETISSLNFAKRTRAIMSNKEVSMELKKQREKQITELEEEVKETEKQIQNIKDEIKNAEFNLINNKKLFSTTQNVTENDEVETCINPKDDVENIIETGKECKKYMKSNVSNSGPRFMSPTVASRQRKNAVERDSISLRSKTIRSIVTRSSVQFSCSQTLSYSDIHVKALLQSSKGKSGHTEAEANTTVLTERTNALNLKEIIMSKTQQQRPEEKEAIKYGDVFGVKGDIASNVVAPKDAAMMQKAENDMIGKTKRGGAAAAMQSAAMKNEKSGVVGHNDTSKIVGDGGVNLSESNDTGNRVISESVAGQVLHKVEENDKERKICKLAEVVEQYSQKVPVRSSMAPSSIAEEVGIGDGGNVGITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRTNIVPGGVAAAAQSAATLNSRLTKHDEKTKLRDILADATSKLPSDRAATRRDAEGVVSAELRNDPYLTTHPAAAAASVAAAARLNQNNHN 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0529 818 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 517 - -
Lal24g0529 818 MobiDBLite consensus disorder prediction 440 455 - -
Lal24g0529 818 PRINTS Kinesin heavy chain signature 97 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0529 818 PRINTS Kinesin heavy chain signature 221 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0529 818 PRINTS Kinesin heavy chain signature 253 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0529 818 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0529 818 MobiDBLite consensus disorder prediction 599 627 - -
Lal24g0529 818 Pfam Seed maturation protein 692 749 IPR007011 -
Lal24g0529 818 Pfam Seed maturation protein 757 815 IPR007011 -
Lal24g0529 818 Pfam Seed maturation protein 547 601 IPR007011 -
Lal24g0529 818 SMART kinesin_4 26 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0529 818 ProSiteProfiles Kinesin motor domain profile. 28 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0529 818 Gene3D Kinesin motor domain 25 392 IPR036961 -
Lal24g0529 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 385 IPR027417 -
Lal24g0529 818 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 3 517 - -
Lal24g0529 818 Coils Coil 350 391 - -
Lal24g0529 818 Pfam Kinesin motor domain 54 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal24g0529 818 MobiDBLite consensus disorder prediction 440 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0529 Lal-Chr24 3714627 3721037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0529 3 349 Calmodulin-binding Proteins AT5G65930 35.196 6.09e-59 216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0529 24 3714627 3721037 Lal24g0529 24 3714627 3721037 ECH
Lal12g0861 12 7047339 7055709 Lal24g0529 24 3714627 3721037 LSH
Lal13g0683 13 4423537 4427250 Lal24g0529 24 3714627 3721037 LSH