Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0525 ATGGGGAGTGACGGTGACGCTACCCATACATATTATTGTTTATGGGTGAATAAGAAAAGCTCTGCTAATAAATCAGAAAAGGTCCAAACAGGCGAGTCTTTTAACAGGAGAATAGGATCTCTATTTTCTTGCTCTGCTTCTGCCCAAGATTTGAGACAATTTGACTTGGAGAAAGAGAAAGAAGACGAGGCATCTCCGAGGGGAGTCTTGGAATCATGCATTAGAGACTTTGAACCCGATCAACAACCAGCTGAATCGGAGACCAGTTGTTCAAGTCCGAGGGAACAATCACATTGGGGCAATTTTTTCAGACTGTGGAAAAAAAGATCATTTAAGCGGCTGCCGTCGTCGTTGCAAACCTTGCCCTCTACTATTGGTGTGCCAAAGCTACCAAAGTGGAGAAGCAAAAGCACTAGAGAAAATCCTTCTCTGAATAATCTATACAACTTCAGGTCTTCATTGGTGACTTTTAGCCTCTCTGAACTGAGAAATGCAACCAATAATTTTAGCAATGAAAATATAATTGGAAGAGGTGGTTTTGCGGAGGTTTTCAAGGGTCGTCTCCAAGATGGGCAACTAATAGCTGTGAAGAAACTGACTAAAGGGACTACTGAAGAAATGATAGCCGGCTTTTTATCTGAGCTTGGCGTTATCGCTCATGTCGATCATCCTAATACTGCCAAGCTTATTGGATGTGGTGTAGAAGGAGGAATGCACCTTGTCTTTGAACTATCTACACTGGGATGTCTGGGATCTCTTCTTCATGGTCCTGATAAAAACAAATTGGATTGGAGCAAAAGGTACAAAATTGCTCTGAGAATAGCCGATGGCCTCCTCTACCTGCATGAGAATTGTCACCGGCGGATTATTCACAGAGATATCAAGTCAGAGAATATTCTGCTCACTGAGAATTTTGAGCCACAGATTTGTGATTTTGGGCTTGCAAAATGGTTACCTGAAGATTGGACTCACCATAATGTATCAAAGTTTGAAGGCACATTCGGGTATTTTGCTCCTGAATATTGCATGCATGGCGTTGTAGATGAGAAAACAGATGTTTATTCTTTTGGGGTCCTACTTTTGGAGATCATAACTGGGCACCCTGCTTTGGATCATATGCAGCAGAGTGTTCTGCTATGGGCAAAACCTTTGCTAGATGCTAATAATATCAAGGAACTCGTTGATCCTTCTCTTGGCGATGATTATGACCGAGGACAGATGGATCATGTTGTTTTGACTGCATCGCTGTGTGTTGATCAGTCCCCTATCCTGCGCCCCCGTATGAGTCAGGCAATATTGCATGTGCTCTTGAGTGTCTTGGATTTCATCTTGTATTTTATGATAGCATGCATAGTGATAATACAAGTGAAAGAAAAGAGTGAGATTGTAACACTACTAAGAGGTGATAAGTGTGTCACGGGATCTAAAAAATCATACCAAAGGAGGCCTTACCTGAGAACATACTCAGAAGAGTTACTAGATGTACAAGAATACAACTCAACAAAATATTTGAGAAATCTCAATAGAATGAAGCAGGTTATGTTGGATCTTGATAGCTAA 1560 0.4141 MGSDGDATHTYYCLWVNKKSSANKSEKVQTGESFNRRIGSLFSCSASAQDLRQFDLEKEKEDEASPRGVLESCIRDFEPDQQPAESETSCSSPREQSHWGNFFRLWKKRSFKRLPSSLQTLPSTIGVPKLPKWRSKSTRENPSLNNLYNFRSSLVTFSLSELRNATNNFSNENIIGRGGFAEVFKGRLQDGQLIAVKKLTKGTTEEMIAGFLSELGVIAHVDHPNTAKLIGCGVEGGMHLVFELSTLGCLGSLLHGPDKNKLDWSKRYKIALRIADGLLYLHENCHRRIIHRDIKSENILLTENFEPQICDFGLAKWLPEDWTHHNVSKFEGTFGYFAPEYCMHGVVDEKTDVYSFGVLLLEIITGHPALDHMQQSVLLWAKPLLDANNIKELVDPSLGDDYDRGQMDHVVLTASLCVDQSPILRPRMSQAILHVLLSVLDFILYFMIACIVIIQVKEKSEIVTLLRGDKCVTGSKKSYQRRPYLRTYSEELLDVQEYNSTKYLRNLNRMKQVMLDLDS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0525 519 ProSiteProfiles Protein kinase domain profile. 169 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0525 519 Pfam Protein tyrosine and serine/threonine kinase 172 378 IPR001245 GO:0004672|GO:0006468
Lal24g0525 519 Gene3D Phosphorylase Kinase; domain 1 131 243 - -
Lal24g0525 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Lal24g0525 519 ProSitePatterns Protein kinases ATP-binding region signature. 175 198 IPR017441 GO:0005524
Lal24g0525 519 SUPERFAMILY Protein kinase-like (PK-like) 151 453 IPR011009 -
Lal24g0525 519 PANTHER OS08G0249100 PROTEIN 41 512 - -
Lal24g0525 519 Gene3D Transferase(Phosphotransferase) domain 1 247 440 - -
Lal24g0525 519 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 41 512 - -
Lal24g0525 519 SMART serkin_6 169 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0525 Lal-Chr24 3683855 3687763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0525 154 432 Receptor kinase-like Gene Family AT1G53420 43.750 2.19e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal24g0525 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0525 - - cam:101512181 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0669 13 4338713 4345975 Lal24g0525 24 3683855 3687763 LSH