Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0519 ATGAAGAGTGTTATGACGGTTGAAGCTAGACTTGAAAAAGTCAAAATGATGAAGGAATTTGTCACAGTTATTTTTGACAAAGCAGTTGAAGACACTGCCTCTTGTCCTATATATTGTAAGCTACTCTTTCGTCTCAATAACAAGCTGCCTCCATTACCATCTTTAGAACTTTTTGGCAAAGATATTACTGTGAAAAGAATACTCACAAATATGTTCCAGGATTGTCTTAAATCTGCTGATAAAAAGTTGATTCCACTTGGAAATATCCCTTTCATTGTTGAGCTGTTTAAGCAAAAATTGGTTCCTGAATGGATTGTCCATCAAATTCTTGATCACCTTTTAGGAATATCTTGGCTACCTAGCAACTATGTTGAAGCCTTATGTCAGTTACTAAACAGTATTGGTAAGCTACTTGATAAAAGTCCAAAATCTTTAAAGATCATAAATGACATGCACTTTAGGAAGTTGAAAGAATTTAGCACAAATACCCAACTTCCATCAAAGGTGAGGTTCATGGTTTGTGATGTTTTAAACTTGCGTGCAAAAAAATGGATCCGTTATCTTGTTCCTGATCTTAAAATGAACGATTCTCTTCTTCAAGACATGGTTTTTTCTTTCCTTGAAGAATATTTCAGTGATATCTATTCTATTGATGTAGTAGAGTCTGTTAAGCATCTGCAATCTCCAGCTTACCACCCTGACATTGTTAAGGAAGCTATTTTCCTTGGACTAAGTAGAATTCCATCATGTGTTGAAGGAGTTAGTGATTTTTTAAAGTGTCTGTTTACTAACTGTGTGTTTTCAGCAAGAGACATAGTTGAAGGTTGTCTGTTGTTTGCATCTCTGGTGGATGATATTGCCATAGATTTTCCTGAATCACCAGATAATTTTGGTGAGATAATTGCTAAACTAGTTTTGGCTGGATGTTTGGATTTTGTGGCTCTGAGAGACATCTTTCGGGAAGTGGTTTTATGTAACTTCTCAGACTTGGTTTATGGCCGTTTTCTAAATGTAATATCGTTTTCCAGCCTATACGACTTCTTATCTATAGATTTAGAATGTGTAGAGGGGCCCTGA 1077 0.3565 MKSVMTVEARLEKVKMMKEFVTVIFDKAVEDTASCPIYCKLLFRLNNKLPPLPSLELFGKDITVKRILTNMFQDCLKSADKKLIPLGNIPFIVELFKQKLVPEWIVHQILDHLLGISWLPSNYVEALCQLLNSIGKLLDKSPKSLKIINDMHFRKLKEFSTNTQLPSKVRFMVCDVLNLRAKKWIRYLVPDLKMNDSLLQDMVFSFLEEYFSDIYSIDVVESVKHLQSPAYHPDIVKEAIFLGLSRIPSCVEGVSDFLKCLFTNCVFSARDIVEGCLLFASLVDDIAIDFPESPDNFGEIIAKLVLAGCLDFVALRDIFREVVLCNFSDLVYGRFLNVISFSSLYDFLSIDLECVEGP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0519 358 Gene3D - 1 83 - -
Lal24g0519 358 SMART if4_15 1 183 IPR003890 GO:0003723|GO:0005515
Lal24g0519 358 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 192 338 IPR045208 GO:0003743
Lal24g0519 358 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 14 81 IPR045208 GO:0003743
Lal24g0519 358 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 82 185 IPR045208 GO:0003743
Lal24g0519 358 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 192 338 - -
Lal24g0519 358 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 14 81 - -
Lal24g0519 358 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 82 185 - -
Lal24g0519 358 Pfam MA3 domain 200 311 IPR003891 -
Lal24g0519 358 Pfam MIF4G domain 15 183 IPR003890 GO:0003723|GO:0005515
Lal24g0519 358 SUPERFAMILY ARM repeat 12 185 IPR016024 -
Lal24g0519 358 Gene3D - 192 349 - -
Lal24g0519 358 Gene3D - 84 185 - -
Lal24g0519 358 ProSiteProfiles MI domain profile. 198 320 IPR003891 -
Lal24g0519 358 SUPERFAMILY ARM repeat 195 326 IPR016024 -
Lal24g0519 358 SMART ma3_7 199 311 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0519 Lal-Chr24 3654291 3655367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0519 194 356 Eukaryotic Initiation Factors Gene Family AT2G24050 35.928 1.93e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0519 K03260 - qsu:112015751 219.164